Gene Avin_09220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_09220 
Symbol 
ID7759870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp867468 
End bp868652 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content67% 
IMG OID643803834 
ProductMandelate racemase/muconate lactonizing enzyme 
Protein accessionYP_002798136 
Protein GI226943063 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.986442 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATTC CAACCATCAA GCAGGTCCGC GCCTTCGTCC TGCGTGGCGG CGGCGCCGAC 
TACCACGACC AGGGCGACGG CCACTGGATC GACGATCACA TCTCCACGCC GATGGGCAAA
TACCCCGAGT ACCGGCAGAG CCGGCGCAGC TTCGGCATCA ACGTGCTCGG CACCCTGGTG
GTGGAGATCG AGGCCAGCGA CGGCAATGTC GGCTTCGCCG TGACCACCGG CGGCGAGCCG
GCGGCCTATA TCGTCGAGAA GCACCTGGCG CGTTTCCTCG AAGGGGCCAG GGTCACCGAC
ATCGAGCGCA TCTGGGACCA GATGTACAAC TCGACGCTCT ACTACGGGCG CAAGGGCCTG
GTGATCAACA CCATCTCCGG CGTCGACCTG GCGCTGTGGG ACCTGCTCGG CAAGGTTCGC
CGGGAGCCGG TGCACCAGTT GCTCGGCGGC GCGGTGCGCG ACGAGTTGCA GTTCTACGCC
ACCGGCGCGC GTCCCGACCT GGCGCAGAAG ATGGGCTTCA TCGGCGGCAA GATGCCCCTG
CACCACGGCC CGTCCGAGGG CGAGGAGGGC CTGAAGAAGA ACCTGGAGGA ACTGGCGACC
ATGCGTGAGC GGGTCGGTCC GGACTTCTGG CTGATGTTCG ACTGCTGGAT GAGCCTGGAC
CTGAACTACG CCACCCGACT GGCCCGGGGC GCCCGCGAGT ACGGCCTGAA GTGGATCGAG
GAGGCGCTGC CGCCGGACGA CTACTGGGGT TACGCCGAGC TGCGCCGCAA TGCGCCGACC
GGAATGATGG TCACCACCGG CGAGCACGAG GCCACTCGCT GGGGCTTCCG CATGCTGCTG
GAGATGGGCT GCTGCGACAT CATCCAGCCG GACGTGGGCT GGTGCGGCGG GGTCACCGAG
CTGCTCAAGA TCTCCGCGCT GGCCGACGCC CACAACGCGC TGGTCGTGCC CCATGGCTCC
TCGGTGTACA GCTACCACTT CGTCGCCACC CGGCAGAACA GCCCGTTCGC CGAGTTCCTG
ATGATGGCGC CCAAGGCCGA CCAGGTGGTG CCGATGTTCC ACCCGCAACT GCTCGGCGAG
CCGGTCCCGG AGAATGGCCG CATGCGCCTC TCGCGCCTCG ACCAGCCGGG TTTCGGCGTC
ACCCTGAACC CGGAATGCCA ACTGCATCGT CCCTACACCC ATTGA
 
Protein sequence
MSIPTIKQVR AFVLRGGGAD YHDQGDGHWI DDHISTPMGK YPEYRQSRRS FGINVLGTLV 
VEIEASDGNV GFAVTTGGEP AAYIVEKHLA RFLEGARVTD IERIWDQMYN STLYYGRKGL
VINTISGVDL ALWDLLGKVR REPVHQLLGG AVRDELQFYA TGARPDLAQK MGFIGGKMPL
HHGPSEGEEG LKKNLEELAT MRERVGPDFW LMFDCWMSLD LNYATRLARG AREYGLKWIE
EALPPDDYWG YAELRRNAPT GMMVTTGEHE ATRWGFRMLL EMGCCDIIQP DVGWCGGVTE
LLKISALADA HNALVVPHGS SVYSYHFVAT RQNSPFAEFL MMAPKADQVV PMFHPQLLGE
PVPENGRMRL SRLDQPGFGV TLNPECQLHR PYTH