| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_08670 |
|---|
| Symbol | xylJ |
|---|
| ID | 7759817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 823700 |
|---|
| End bp | 824485 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643803781 |
|---|
| Product | 4-oxo-4-pentenoate hydratase, XylJ |
|---|
| Protein accession | YP_002798083 |
|---|
| Protein GI | 226943010 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
|---|
| TIGRFAM ID | [TIGR03220] 2-oxopent-4-enoate hydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCAAG CCCTGCTCAA CCAGTACGCC GACGAGCTTT ACCGCTCGCT GGCGGATCGC
CGTCCCATCG CTCCGCTGAC CGAGCGCGAC CCCGACCTCA GCCTGGAAGA GGCCTACCAG
ATCCAGATGC GGGTGCTCGC CCGGCGCCTG GACGCCGACG GCGAGAAGGT GATCGGCAAG
AAGATCGGCG TCACCAGCCG GGTGGTCATG GACCTGCTCA AGGTCGACCA GCCCGACTTC
GGTCACCTGA CCTCCGGCAT GCTGCGCGAG GACGGCGCGG CCATCGAGGC CGCCAGCCTG
ATCGCGCCGA AGGCCGAGGG TGAGATCGCC TTCGTGCTCA AGCACGAGTT GGCCGGTCCG
GGCGTGACCG TCGCCGACGT GCTGCGCGCC ACCGAATTCG TGGTGCCCTG CTTCGAGATC
GTCGATTCGC GCATCGCCGA CTGGAAGATC CGCATCCAGG ACACCGTGGC CGACAACGCC
TCCTCGGCGC TGTTCGTGCT CGGCGACGCC GCCGTCGATC CGCGCCGGCT GGATCTGGGC
GTGGTCGGTA TGACCCTCGA AGTCAACGGC GAGATCGCCG CCACCGGCGC CGGCGCCGCC
GCGCTGGGCC ATCCGGCCAA TGCCGTGGCC TGGCTGGCCA ATACCCTCGG CCGCCTGGAA
ATGCCGCTCA AGGCCGGCGA GGTGATCCTC TCCGGCTCCC TCTCCACCAT GCTGCCGGTC
AAGGCCGGCG ACAACCTGCG CATCGGCATC GGCGGCATCG GCTCGGCCGG CGTGCGCTTC
GTCTGA
|
|---|
| Protein sequence | MRQALLNQYA DELYRSLADR RPIAPLTERD PDLSLEEAYQ IQMRVLARRL DADGEKVIGK
KIGVTSRVVM DLLKVDQPDF GHLTSGMLRE DGAAIEAASL IAPKAEGEIA FVLKHELAGP
GVTVADVLRA TEFVVPCFEI VDSRIADWKI RIQDTVADNA SSALFVLGDA AVDPRRLDLG
VVGMTLEVNG EIAATGAGAA ALGHPANAVA WLANTLGRLE MPLKAGEVIL SGSLSTMLPV
KAGDNLRIGI GGIGSAGVRF V
|
|---|
| |