| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_08550 |
|---|
| Symbol | |
|---|
| ID | 7759809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 814211 |
|---|
| End bp | 815134 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643803773 |
|---|
| Product | Transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002798075 |
|---|
| Protein GI | 226943002 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.763554 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAAATCA GGCAGTTGAA GTATTTCGTG GCGGTGGCCG AGGAACTGAA CTTCAATCGC
GCCGCCGAAC GGCTCTACAT CACCCAGCCC GCCCTGAGCC GCCAGATCCA GCAACTGGAG
GAGGCCATTC CCGCCGTGCT GCTGGAGCGC AACTCCAAGC GTGTCGCGCT GACCGATGCC
GGTCAGGCCT TCTACCATCA GGCGCTGAAC ATCCTCGCCC AGTTGCAGCG CGCGGCCGAC
GAGTCGCGCC TGCTGGCCGA GGGCAAGAAG GGCAGCCTGG TGATCGGCAT CTTCGGCTCG
TCGATCCTCG ACTTCATCCC GCGGGTGCTG CTGGAGTTCG GCCGCACCCA TCCGGCCGTG
GAGATCTCCC TGCATCCGAT GGACAAGGAC GCGCAGATCC AGGCGCTGCG CGAGCGCCGC
CTGACCATCG GCTTCAACCG CCTGGTGCCG GGCGAGCCGG ACATCGAGCA GGAACTGGTG
CGCCGGGAGG CGCTGATGCT GGCGCTGCCG GCCAAGCATC CGCTGGCGGC GCGCGACGCC
ATCGAGCTGG GCGAGGTGTT GCAGGAGCCC TTCATCCTCT ATCCGCGCGG CGTGCGGCGC
GGCCTGACCA CCCATGTGCG GCGGCTGTTC GCCGACTACG ATGCGCTGCC CAGGGTGGCC
CAGGAAGTCA CCGACGTGAC CACCAGCATC GCCCTGGTGG CCGGCGGCCT GGGGCTCTGC
GTGGTACCCC GCTCCGCCGT CAACCTGCGC CTGCCGGGCG TCGAGTATCG CGCCCTGCGC
TGCCGCGGCA AGGCCGAGAT CGAGCTGGCC TGCCTGTACC GCAAGGGCGA CGGCTCGCCC
CTCCTGCGCG CCTTCCTGGC CACGGTCCGC CAGCTCGCCA GCCTCGAGGC GGCGCCCGCG
GCCGACGACC GGCAGACGTC CTGA
|
|---|
| Protein sequence | MEIRQLKYFV AVAEELNFNR AAERLYITQP ALSRQIQQLE EAIPAVLLER NSKRVALTDA
GQAFYHQALN ILAQLQRAAD ESRLLAEGKK GSLVIGIFGS SILDFIPRVL LEFGRTHPAV
EISLHPMDKD AQIQALRERR LTIGFNRLVP GEPDIEQELV RREALMLALP AKHPLAARDA
IELGEVLQEP FILYPRGVRR GLTTHVRRLF ADYDALPRVA QEVTDVTTSI ALVAGGLGLC
VVPRSAVNLR LPGVEYRALR CRGKAEIELA CLYRKGDGSP LLRAFLATVR QLASLEAAPA
ADDRQTS
|
|---|
| |