| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_08480 |
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| Symbol | |
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| ID | 7759802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 804331 |
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| End bp | 806127 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643803766 |
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| Product | thiamine pyrophosphate protein |
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| Protein accession | YP_002798068 |
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| Protein GI | 226942995 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00807055 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACGA CAGTCGGTGA CTTTCTGGTC GAGCGCCTGT ACCAGTGGGG TGTGCGACGC
ATCTACGGCT ATCCTGGCGA CGGCATCAAC GGGGTGTTCG GCGCCCTGAG CCGTGCCCGG
GAGAAGATCC GCTTCATCCA GGTCCGCCAC GAGGAAATGG CCGCCTTCAT GGCTTCGGCG
GAGGCCAAGT TCGGCGGCGG CCTGGGCGTC TGCATCGCCA CCTCGGGACC CGGCGCCTCG
CACCTGATCA CGGGGCTCTA CGATGCCCGC CTGGACCACA TGCCGGTGCT GGCGATCGCC
GGCCAGCAGG CGCGCACCGC CATGGGCGGG CACTATCAGC AGGAGGTGGA CCTGGTGTCG
ATGCTCAAGG ACGTGGCGGG AGCCTTCGTC CAGCAGGCCA GTGCGCCGGA GCAGGTGCGC
CATCTGGTCG ACCGGGCGAT CCGCACCGCG CTGGGCGAGC GCCGGGTGAC CGCCATTGTT
TTGCCCAACG ACCTGCAGGA GATGGACTAC AGCGAGCCGC CGCACGCGCA CGGTACCCTG
CACTCCGGCA TCGGCTACAG CCGCCCCAGG AAGCTGCCCT ACGACGAGGA CCTGCAGCGC
GCCGCCGAAG TGCTCAATGC CGGCAGCAAG GTCGCCATCC TGGTCGGCGC CGGTGCCCTG
GGGGCCAGCG ACGAGGTCAT CCAGGTCGCC GAAAGGCTCG GCGCCGGCGT GGCCAAGGCG
CTGCTCGGCA AGGCGGCGCT GCCCGACGAA CTGCCCTGGG TCACCGGCTC CATCGGCCTG
CTCGGCACCG AGCCGAGCTA CAAGCTGATG AGCGAATGCG ACACGCTGCT GATGATCGGC
TCCGGCTTTC CCTATTCCGA ATTCCTGCCC AGGGAGGGCC AGGCGCGTGG CGTGCAGATC
GACCTCAAGG CCGACATGCT CGGCCTGCGC TACCCGATGG AGGTCAACCT GGAGGGCGAC
GCCGCCGAAA CCCTGCGCGC CCTGCTGCCG CTGCTGCTGG AAAAGGAGGA TCGCCGCTGG
CGCGCCGACA TCGAGGAGTG GCGCGGCGAC TGGGAGAAGA AGCTCGAGCG CCGCGCCCTG
GCCTCGGCCA AGCCGATCAA CCCGCAGCGG GTGGTCTTCG AACTGTCGCC GCGCCTGCCC
GAGCGGGCCG TCGTCACCTG CGACTCCGGC TCCTGCGCCA ACTGGTTCGC CCGCGACCTG
AAAATCCGCC GTGGCATGAT GTGCTCGCTG TCCGGCGGTC TGGCCTCCAT GGGCGCCGCC
GTGCCCTATG CCATCGCCGC CAAGTTCGTC CATCCGGAGC GCGCGGTGGT GGCCCTGGTC
GGCGACGGCG CCATGCAGAT GAACAACATG GCCGAACTGA TCACCGTCGC CAAGTATTGG
CGGGAATGGC GGGACCCGCG CTGGATCTGC TGCGTATTCA ACAACGAGGA CCTCAACCAG
GTCAGCTGGG AGCAGCGGGT CATGGCGGGC GACCCGAAAT TCGAGGCTTC GCAGGACATT
CCCGACGTGC CCTATCACCG TTTCGCCGAA TCCATCGGCC TCAGGGGCAT TTACGTCGAC
CGCGAGGATC TCGTCGCCGC CGCCTGGGAG GAAGCCCTGG CCGCCGACCG GCCGGTGCTG
ATCGAGTTCA AGACCGACCC CGACGTGCCG CCGCTGCCGC CGCACATCAC GCTCGAGCAA
GCCGGGAAAT TCGCCGGCAC CTTGCTGTGG GGCGACCCGA ACCAGGCCGG CATCATCGCC
CAGACTGCCA AGCAGGTGCT CGGCAGCGTC CTGCCCGGCC GTCACCGCGA TGGCTGA
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| Protein sequence | MATTVGDFLV ERLYQWGVRR IYGYPGDGIN GVFGALSRAR EKIRFIQVRH EEMAAFMASA
EAKFGGGLGV CIATSGPGAS HLITGLYDAR LDHMPVLAIA GQQARTAMGG HYQQEVDLVS
MLKDVAGAFV QQASAPEQVR HLVDRAIRTA LGERRVTAIV LPNDLQEMDY SEPPHAHGTL
HSGIGYSRPR KLPYDEDLQR AAEVLNAGSK VAILVGAGAL GASDEVIQVA ERLGAGVAKA
LLGKAALPDE LPWVTGSIGL LGTEPSYKLM SECDTLLMIG SGFPYSEFLP REGQARGVQI
DLKADMLGLR YPMEVNLEGD AAETLRALLP LLLEKEDRRW RADIEEWRGD WEKKLERRAL
ASAKPINPQR VVFELSPRLP ERAVVTCDSG SCANWFARDL KIRRGMMCSL SGGLASMGAA
VPYAIAAKFV HPERAVVALV GDGAMQMNNM AELITVAKYW REWRDPRWIC CVFNNEDLNQ
VSWEQRVMAG DPKFEASQDI PDVPYHRFAE SIGLRGIYVD REDLVAAAWE EALAADRPVL
IEFKTDPDVP PLPPHITLEQ AGKFAGTLLW GDPNQAGIIA QTAKQVLGSV LPGRHRDG
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