Gene Avin_08270 details

Gene Information

• Locus tag: Avin_08270
• Symbol: ftsH
• ID: 7759781
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 784016
• End bp: 785866
• Gene Length: 1851 bp
• Protein Length: 616 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 643803745
• Product: ATP-dependent metallopeptidase M41, FtsH
• Protein accession: YP_002798047
• Protein GI: 226942974
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAACAAC AGGCGCAGTT CCATATCGGT TACTGGTTCC TCGCGGTGCT GGGGTTCGTG 
CTCATCCAGA GCCTGCTGAC CGAGCACCAG CAGGTGGCGC AGATTCCCTA CAGCGAGTTC 
GAGCAGTACC TCAAGGAAGG GCGGGTCGAG GAGCTGGCGA TCACCGACCG GCAGATCCAG 
GGGACGCTCA AGGAGCCGTT GCCCGGCGGC CAGACCCGTT TCGTCGCCAT CCGCATCGAG 
CCGCAACTGG CCGAGCACCT GCAGCAATAT CCGGTGCGCT ATGCCGGCAA GGTCGAAAGC 
ACCCTGCTGC GCGACCTGTT GTCCTGGACC CTGCCGGCGC TGATCTTCTT CAGCCTCTGG 
CTGTTCTTGC TCAAGCGCAT CGGCGGCGGC CTCGGCGGCG GCATGATGCA GATCGGCAAG 
AGCAAGGCGA AGGTCTACGT CGAGACCGAT ATGAAGGTGA CCTTCGCCGA CGTGGCCGGA 
GTCGACGAGG CCAAGGACGA GCTCAAGGAG ATCGTCGATT TCCTCAAGGA CCCGCAGACC 
TACGGTCGCC TCGGCGGGCG CATGCCCAAG GGCGTGCTGC TGGTCGGTCC GCCCGGCACC 
GGCAAGACCC TGCTGGCGCG GGCGGTGGCC GGCGAGGCGA AGGTGCCGTT CTTCTCGATC 
TCCGGCTCCG AGTTCGTCGA GATGTTCGTC GGCGTCGGTG CGGCGAGGGT CCGCGACCTG 
TTCGAGCAGG CCCGGGCGCA GGCCCCGGCG ATCATCTTCA TCGACGAACT GGACGCCCTC 
GGCCGGGCCC GTGGCGTCGG CCCGCTGGGC GGCGGCCACG ACGAGAAGGA GCAGACCCTC 
AACCAGTTGC TGGTGGAGCT GGATGGCTTC GACACCTCCA CCGGGCTGGT CCTGCTGGCC 
GCCACCAACC GTCCGGAAAT CCTCGATCCG GCGCTGCTGC GCGCCGGCCG CTTCGACCGC 
CAGGTGCTGG TCGACCGGCC GGACAAGGCC GGGCGGGTGC AGATCCTCCA GGTGCACCTG 
AAGAGGGCGC GGCTGTCGGC CGATGTCGAT CCGCAGCAGA TCGCCGCGCT GACCCCGGGC 
TTCACCGGCG CCGACCTGGC CAACCTGGTC AACGAGGCGG CCCTGCTCGC CACCCGTCGG 
CGTGCCGACG CGGTGACCAT GGACGACTTC ACCGCGGCCA TCGAGCGCAT CATCGCCGGC 
CTGGAAAAGC GCAACCGCCT GCTCAATCCG AAGGAGCGGG AAATCGTCGC CCATCACGAG 
ATGGGGCACG CACTGGTAGC GATGGCCCTG CCGGGGATGG ACCCGGTGCA CAAGGTCTCG 
ATCATTCCGC GCGGCATGGG GGCGCTCGGC TACACCATCC AGCGGCCCAT CGAGGACCGC 
TTCCTGATGA CCCGCGAAGA GCTGGAGAAC AAGATGGCGG TGCTGCTCGG CGGCCGCGCG 
GCCGAGTGGA TAGTGTTTTC CCACTTCTCC ACCGGCGCCG CCGACGACCT GGCCAAGGTC 
ACCGACATCG CCCGCGCCAT GGTCACTCGC TACGGCATGT CGGAGCGCCT CGGCCATGTC 
AGCCTGGAGC GCGAGCAGCG CAGCTTCCTG GGCGCCGAGC AGATGTACGG CCTGCCGCCT 
CGCCACGAAT ACGGCGAGAC CACCGCGACC GCCATCGACA CCGAGGTGCA GGCGATCGTC 
GAGCACGCCT TCCAGCGTAC CGTGACGCTG TTGGAAGAGC GCCGGGCGCT GCTCGAGCGC 
AGCGCCCGGC GCCTGCTGGA GGAGGAAACC CTGGATGCCG AGCAACTGGC CGAGTTGGTC 
GGCAAGGCGC AGGGCACTAC CGCCGAACGA TCCGGGGCGA TACCGCAATG A 

 

Protein sequence

MKQQAQFHIG YWFLAVLGFV LIQSLLTEHQ QVAQIPYSEF EQYLKEGRVE ELAITDRQIQ 
GTLKEPLPGG QTRFVAIRIE PQLAEHLQQY PVRYAGKVES TLLRDLLSWT LPALIFFSLW 
LFLLKRIGGG LGGGMMQIGK SKAKVYVETD MKVTFADVAG VDEAKDELKE IVDFLKDPQT 
YGRLGGRMPK GVLLVGPPGT GKTLLARAVA GEAKVPFFSI SGSEFVEMFV GVGAARVRDL 
FEQARAQAPA IIFIDELDAL GRARGVGPLG GGHDEKEQTL NQLLVELDGF DTSTGLVLLA 
ATNRPEILDP ALLRAGRFDR QVLVDRPDKA GRVQILQVHL KRARLSADVD PQQIAALTPG 
FTGADLANLV NEAALLATRR RADAVTMDDF TAAIERIIAG LEKRNRLLNP KEREIVAHHE 
MGHALVAMAL PGMDPVHKVS IIPRGMGALG YTIQRPIEDR FLMTREELEN KMAVLLGGRA 
AEWIVFSHFS TGAADDLAKV TDIARAMVTR YGMSERLGHV SLEREQRSFL GAEQMYGLPP 
RHEYGETTAT AIDTEVQAIV EHAFQRTVTL LEERRALLER SARRLLEEET LDAEQLAELV 
GKAQGTTAER SGAIPQ