Gene Avin_08060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_08060 
Symbol 
ID7759760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp762442 
End bp762843 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content64% 
IMG OID643803724 
ProductBiopolymer transport protein ExbD 
Protein accessionYP_002798026 
Protein GI226942953 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTTCT CGACCCAGGA AAGCGACGAA GTCCTCAGCG AGATGAACGT CACGCCGCTG 
GTCGACGTGA TGCTGGTGCT GCTGGTGGTG TTCATCGTCA CCGCGCCGAT GCTGACCAAC
AGCATCCCCA TCAACCTGCC CAAGACCGAG GCGGTCGCCC CGCCGGACAC CAAGGACCCG
CTGGTGGTGA GCATCGATGG CAGCGGCAAA CTGTTCATCA ACAAGGACGA GATCCAGCCC
GACCTGCTGG AAAGCAACCT GCAGGCGGCC AAGGCCGCGG ATGCCGAGCT GCGCGTGCAG
TTGCAGGCCG ACGACCAGGT GGACTATGGC GTGGTGGCCA GAGCCATGGC CGCCATCGAG
CGGGCGGGGA TCACCAAGCT CGCGGTGATT ACCGCAAGAT GA
 
Protein sequence
MAFSTQESDE VLSEMNVTPL VDVMLVLLVV FIVTAPMLTN SIPINLPKTE AVAPPDTKDP 
LVVSIDGSGK LFINKDEIQP DLLESNLQAA KAADAELRVQ LQADDQVDYG VVARAMAAIE
RAGITKLAVI TAR