Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_07880 |
Symbol | ispA-1 |
ID | 7759742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 747272 |
End bp | 748159 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643803706 |
Product | geranyltranstransferase |
Protein accession | YP_002798008 |
Protein GI | 226942935 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.408699 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGCGG CCTACCAGAA GCAGTGCCAG GCCCGCGTCG ACGCCGCCCT GGAAGCCCTC CTGCAGCCCC CGCGCGCCGA ACTGCAGCGG CTCTACCAGG CGATGCGCTA CAGCGTCGTC AACGGCGGCA AGCGGGTCCG CCCGCTGCTG GTCTACGCCG CCTGCGAGGC CCTCGGCGGC ACGCCGGAGC GGGCCGAGGG CGCCGCCTGC GCGGTGGAGC TGATCCATGC CTACTCGCTG GTTCACGACG ACCTGCCGGC GATGGACGAC GACGACCTGC GCCGCGGCCA GCCGACCACC CACCGGGCCT TCGACGAGGC CTGCGCGATC CTCGCCGGCG ACGGCCTGCA GGCGCTGGCC TTCGAGGTGC TCACCGATCC CCGGCGCAAT CCCCGGGATG CCGGGTTGCG CCTGGAGATG TCGCGCACCC TGGCCCGGGC CGCCGGCCCG GCCGGCATGG TCGGCGGCCA GGCCATCGAC CTCGAGGCGG TCGGCCGCCG GCTCGACCGC GACGCCCTGG AAACCATGCA CCGGCACAAG ACCGGCGCAC TGATCGAAGC CAGCGTGCGC CTCGGCGCCC TGGCCAGCGG CCGCGCCGAC GAGACCGACC TCGCCGCGCT GGCCGTCTAC GCGCGGGCCA TCGGCCTGGC CTTCCAGGTC CAGGACGACA TCCTCGACGT GGAAAGCGAC ACCGCCACCC TCGGCAAGAC CCAGGGCAAG GACCAGGCCA ACGACAAGCC CACCTACCCC GCGCTGCTCG GCCTCGAGGC CGCCAAGGCC TATGCCCTGG CCCTGCGCGA CCAGGCCCTG GGCGCCCTCG AGGGCTTCGA CGCCGGGGCC GATCCCCTGC GCGCGCTCGC CCGCTACATC GTCGAGCGGC GCCACTGA
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Protein sequence | MIAAYQKQCQ ARVDAALEAL LQPPRAELQR LYQAMRYSVV NGGKRVRPLL VYAACEALGG TPERAEGAAC AVELIHAYSL VHDDLPAMDD DDLRRGQPTT HRAFDEACAI LAGDGLQALA FEVLTDPRRN PRDAGLRLEM SRTLARAAGP AGMVGGQAID LEAVGRRLDR DALETMHRHK TGALIEASVR LGALASGRAD ETDLAALAVY ARAIGLAFQV QDDILDVESD TATLGKTQGK DQANDKPTYP ALLGLEAAKA YALALRDQAL GALEGFDAGA DPLRALARYI VERRH
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