| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_07620 |
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| Symbol | rnr |
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| ID | 7759714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 720260 |
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| End bp | 722845 |
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| Gene Length | 2586 bp |
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| Protein Length | 861 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643803681 |
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| Product | ribonuclease R |
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| Protein accession | YP_002797983 |
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| Protein GI | 226942910 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGATT GGCAAAGTCT CGATCCCGAG GCCGCCCGCG AGGCGGAAAA GTACGATAAC
CCCATTCCCA GTCGCGAGCT GATCCTGCAG CGTCTCGACG AGCGCGGCGC CCCCGCCAGT
CGCGAAGAGC TGGCCGAGGA GTTCGGCCTG CACGAAGAGG AGCAGCTCGA GGCACTGCGC
CGGCGTTTGC GTGCCATGGA GCGCGATGGC CAGTTGATCC ATACCCGTCG CGGCACCTAT
GCGCCGGTGG ACAAGCTCGA TCTGGTGCTC GGCCGGGTCA GCGGTCACCG CGACGGCTTC
GGCTTCCTGA TTCCCGACGA CGGCAGCGAC GACCTCTTCC TCAGTCCGAT GCAGATGCGC
TTGCTGTTCG ACGGCGACCG CGCCCTGGCG CGGGTGTCCG GCTTCGACCG GCGGGGGCGC
CGCGAGGGCG CCATCGTCGA AGTGGTTTCG CGGGCCCATG AAAGCATCGT CGGCCGCTAC
TACGAGGAGA GCGGCATCGG CTTCGTGATT CCCGACAACC CGAAGATCCA GCAGGAGGTG
CTGGTCACCC CGGGGCGTAC GGCCAACGCC TCGGTCAGTC AGTTCGTCGA GATCCGTATC
ACTCACTGGC CGACCCTGCG CTTCCAGCCG CAGGGCGACA TCATCGAGGT GATCGGCAAC
TATATGGCGC CGGGCATGGA GATCGAGGTC GCCCTGCGCA GCTATGACAT CCCCCATGTC
TGGCCGGAGG CCGTGCTCAA GGAGTCGCGC AAGCTCAAGC CCGAGGTGGA TGAGAAGGAC
AAGCTCAAGC GCATCGACCT GCGCCACCTG CCTTTCGTCA CCATCGACGG CGAGGATGCC
CGCGACTTCG ACGACGCGGT CTATTGCGAG AAGAGCCTGC TGGCCCCATT CGCCGGAGGT
TACCGCCTCT ACGTGGCGAT CGCCGACGTT TCCCATTACG TCAGGGTCGG TTCGGCGCTC
GACGAGGAGG CCAGCCGCCG CGGCAACTCG GTGTATTTCC CCGAGCGAGT GGTACCGATG
CTGCCGGAGG AGCTGTCCAA CGGACTCTGC TCGCTCAACC CGCAGGTCGA CCGGCTGGCG
ATGGTCTGCG AGATGACCCT GTCGCGCGCC GGCAAGATGA CCGACTACCA GTTCTACGAG
GCGGTCATCC ATTCCCATGC CCGACTGACT TACAACCGCG TCAGCGCCAT GCTGGAGCAG
CCGAAGAGCC CCGAAGGCAA GCGGCTGCGC AGCATCTATG CCGGGGTGCT GCCGCACCTC
AAGCAACTGC ATTCGCTCTA CAAGGTGCTG GTGAAGGCGC GTCAGGCGCG TGGCGCCATC
GACTTCGAAA CCCAGGAAAC GCGCATCGTC TTCGGCACCG GGCGCAAGAT CGCGGAAATC
CTGCCGACCG AGCGCAACGA TGCGCACAAG TTGATCGAGG AGTGCATGCT CTGCGCCAAC
GTGGCGACCG CCGCGTTCCT GCAGAAGCAC GAGTTGCCGG GCCTCTACCG GGTACACGAT
GGCCCGCCGG CGGAGCGCCT GGAGAAGCTC AAGGCCTTCC TGGGCGAACT GGGCCTGAGC
CTGCATCGCA GCAAGGACGG CCCGACCCCG AAGGACTACC AGATGCTGCT GGAGTCGATC
CAGGGGCGAG CGGATTTCCA CCTGATCCAG ACGGTGATGC TGCGCTCGCT GAGCCAGGCC
GTGTACAGCG CCGAGAACCG CGGCCACTTC GGCCTGAACT ACGAGGCCTA TACCCATTTC
ACCTCGCCTA TCCGGCGCTA TCCGGATCTT CTGGTGCACC GTGCGATCCG TAGCGTGATC
CGTTCCAAGC GCGAGACGCC GCATGTCCGC CGCGCGGGGG CGACGAGTAT GCCCAAGGCG
CGCATCTATC CCTACGACGA AGCCGCCCTG GAGCAACTCG GCGAGTCCTG CTCGATGACC
GAGCGGCGAG CCGACGAGGC GACCCGCGAC GTGGTCAACT GGCTGAAGTG CGAGTTCATG
CAGGATCGCG TCGGCGAGCG CTTCGAGGGG GTGATTTCGG CGGCGACCGG CTTCGGCATC
TTCGTCGAGT TGAAGGACAT CTACGTCGAG GGGCTGGTGC ACGTCACCGC ATTGCCGGCC
GACTACTACC ACTTCGATCC GGTTCATCAT TGCCTGTCCG GGGAGCGCAG CGGGCGCAGC
TTCCGTCTCG GCGACAGCGT GGTCGTGCAG GTGATGCGGG TCGATCTGGA CGAGCGGCGG
ATCGATTTCG AGCTGATCGA GGGCGGCCGC GGACGAATGG CCGGGCGTCG GCGTGACTCC
GAGCCGCCGG AAGAGCCGGT CGAGGAGCGC GCCGTGAAGG GGCCGGGCAA GCGCGCCAAG
GAGGACAAGG CCAAGGGGCT GGCGCCGCTG GCTTCCGAAC TGCTGGCCCA GGCCGAGGCC
ATGCTCGGCA ATACCGACGT GAAGAGAAGC CGGGCGACCA AGCAGGCCTT GCTGGCCGAG
GCCAAGGACG CCAAGACGGA GCGCCGGAAG ACGGCCAAGG CTCCTGCCGG GAAGAGCAGC
GCCAAGCAGT CCAAACCGGC CGGCAGGGGA CCCTCCCGCA AGGGCCGGAG CAAGGCCGGG
ACATGA
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| Protein sequence | MADWQSLDPE AAREAEKYDN PIPSRELILQ RLDERGAPAS REELAEEFGL HEEEQLEALR
RRLRAMERDG QLIHTRRGTY APVDKLDLVL GRVSGHRDGF GFLIPDDGSD DLFLSPMQMR
LLFDGDRALA RVSGFDRRGR REGAIVEVVS RAHESIVGRY YEESGIGFVI PDNPKIQQEV
LVTPGRTANA SVSQFVEIRI THWPTLRFQP QGDIIEVIGN YMAPGMEIEV ALRSYDIPHV
WPEAVLKESR KLKPEVDEKD KLKRIDLRHL PFVTIDGEDA RDFDDAVYCE KSLLAPFAGG
YRLYVAIADV SHYVRVGSAL DEEASRRGNS VYFPERVVPM LPEELSNGLC SLNPQVDRLA
MVCEMTLSRA GKMTDYQFYE AVIHSHARLT YNRVSAMLEQ PKSPEGKRLR SIYAGVLPHL
KQLHSLYKVL VKARQARGAI DFETQETRIV FGTGRKIAEI LPTERNDAHK LIEECMLCAN
VATAAFLQKH ELPGLYRVHD GPPAERLEKL KAFLGELGLS LHRSKDGPTP KDYQMLLESI
QGRADFHLIQ TVMLRSLSQA VYSAENRGHF GLNYEAYTHF TSPIRRYPDL LVHRAIRSVI
RSKRETPHVR RAGATSMPKA RIYPYDEAAL EQLGESCSMT ERRADEATRD VVNWLKCEFM
QDRVGERFEG VISAATGFGI FVELKDIYVE GLVHVTALPA DYYHFDPVHH CLSGERSGRS
FRLGDSVVVQ VMRVDLDERR IDFELIEGGR GRMAGRRRDS EPPEEPVEER AVKGPGKRAK
EDKAKGLAPL ASELLAQAEA MLGNTDVKRS RATKQALLAE AKDAKTERRK TAKAPAGKSS
AKQSKPAGRG PSRKGRSKAG T
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