Gene Avin_07560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_07560 
SymbolhflK 
ID7759708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp714862 
End bp715917 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content66% 
IMG OID643803673 
Productmembrane bound protease regulator HflK 
Protein accessionYP_002797977 
Protein GI226942904 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID[TIGR01933] HflK protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAGGAAA GCCTGAACGG CATGCTGGGT GGCAAGAAGC GTGGCGGTGA TGGAACGGGT 
GGCAAGGGCG GCGGCGGTCT GGGCCTGTTC GGCATAGCCC TGGCCGTGCT GGCGGCTTTC
TGGCTGTACA GCGCGGTCTA CGTGCTGGAC GAGCAGGAAC AGGCCGTGGT GCTGCGCTTC
GGCAAGTATC ACGAAACCGT CGGGCCCGGC CTGAACATCC ATTTCCCGCC GATCGATCGC
AAGTTCGTGG AGAACGTCAC CCGCGAGCGG GCCTACAGCA AGCAGGGGCA GATGCTCACC
GAGGACGAGA ACATCGTCGA GGTGCCGCTC ACCGTGCAGT ACAAGATCAG CAACCTGAAG
GACTTCGTGC TGAACGTGGA CCAGCCCGAG GTCAGCCTGC AGCATGCCAC CGACAGCGCC
CTGCGCCATG TAGTGGGTTC CACCGAGATG GACCAGGTGC TCACCGAAGG GCGCGAGCTG
CTGGCGAGCG AGGTGCGCGA GCGCTTGCAG CGTTTTCTCG ACACCTACCG GACCGGCATC
GTCGTGACTC AGGTGAACGT GCAGAACGCC CAGGCGCCGC GCGAGGTCCA GGAGGCGTTC
GACGATGTGA TCCGGGCGCG CGAGGATGAA CAGCGCGAAC GCAACCAGGC CGAAGCCTAC
GCCAACGGGG TGATTCCGGA GGCGCGCGGC CAGGCCCAGC GGATTCTCGA GGATGCCAAC
GGTTATCGCG AGGAGGTCGT GGCCCGTGCC GAGGGCGAGG CGCAGCGCTT CGGCAAGCTG
GTGGTGGAGT ATCGCAAGGC ACCCGAGGTA ATGCGTCGGC GCCTTTATCT GGAAACCCTG
CAGGAGGTCC TGAGCAACAG CAGCAAGGTC CTGGTCGCCA CCGAGGGCGG GCAGAACAAC
CTGCTCTACC TGCCGCTCGA CAAGATGCTC GAGGGGCGGC CCGGCGGCCC GGCGGCCGGT
TCGTCGGCGC CTGCCGTGCC GGGCGCCGCC GACATGGGCT CGCAGATCAT CAATGATCTG
CAGCAGCGGG ACCTGCGTTC GAGGGAGAGG CGTTGA
 
Protein sequence
MQESLNGMLG GKKRGGDGTG GKGGGGLGLF GIALAVLAAF WLYSAVYVLD EQEQAVVLRF 
GKYHETVGPG LNIHFPPIDR KFVENVTRER AYSKQGQMLT EDENIVEVPL TVQYKISNLK
DFVLNVDQPE VSLQHATDSA LRHVVGSTEM DQVLTEGREL LASEVRERLQ RFLDTYRTGI
VVTQVNVQNA QAPREVQEAF DDVIRAREDE QRERNQAEAY ANGVIPEARG QAQRILEDAN
GYREEVVARA EGEAQRFGKL VVEYRKAPEV MRRRLYLETL QEVLSNSSKV LVATEGGQNN
LLYLPLDKML EGRPGGPAAG SSAPAVPGAA DMGSQIINDL QQRDLRSRER R