| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_07140 |
|---|
| Symbol | |
|---|
| ID | 7759667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 677269 |
|---|
| End bp | 679035 |
|---|
| Gene Length | 1767 bp |
|---|
| Protein Length | 588 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643803635 |
|---|
| Product | ABC-type transport system permease and ATPase component |
|---|
| Protein accession | YP_002797939 |
|---|
| Protein GI | 226942866 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.377405 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATGA GCCAGAGCAA CCCGCGCGCC CTGCCGCTGA GATGGCAGTT CGTCCACCTG
GTGAAACCCT ACTGGAACAG CGAGCGCAAG TGGCTGGTGC GCGGCACCGT CGGCCTGCTC
CTGTTGCTGA CCCTCGCCCA GGTCGGCCTG GCGATCTGGA CCAGCTACTG GCACCGCGAG
CTGTTCGACG CCCTGGAGGC ACGCTCGCTC GATACCCTGC TGCTACAGAT CGCCACCTTC
GCGCTGATCT TCGCCCTGAC CATGCTGGTC ACCGCACTGC ACCTGCACGT CAAGCGCCGC
TTGCAGCTCG ACTGGCGGCA ATGGCTGACC CTGAAGCTGC TCGACCAGTG GCTGACGCAT
GCCCACCACT ACAAGCTGCA GTTCACCAGC GGCGAACACG ACAACCCCGA CGGGCGCATC
GCCGAGGACA TCCGCATCGC CACCGAGAAC GCGATCACCC TCGCCCATTC GCTGGTTTTC
TCCCTGCTGA TCCTCGGCAC CTTCGTCGAT ATCCTGTTCA AGCTTTCCGG CAGCCTGGCG
CTGCCCGGCA CCGACATCGT CATCCCCGGC TTCCTGGTAC TGCTGGCCTT CCTCTACGCC
AGCGGCGGCA GTCTGCTGGG CCTGTTGCTC GGCCGCCCGC TGACCCAGTC CACCAACCGC
CTGCAGACGG TCGAGGCGAA CCTGCGCTTC GGCCTGGCGC GGGCCCGGGA GAACTCCGAG
TCGATCGCCC TGATGCACGG CGAGGGCATC GAGCGCGCCT ACGCCGGCCG GCTGTTCGCC
GACGTCGGCC AGGGCTGGAA CCGGCAGACC GTCGGCTACC TCGGCATCGT GTCCTTTTCC
GCCGGCTACG GGGCGTTGTT GCCGGTGTTC CCGATCCTCG TCGCGGCGCC GCAGTACATC
GCCGGCACCA TGAGCCTCGG CGTGCTGATG CAGGCGGCGC AGGCCTTCCA GCGCCTGACC
TCGGCGCTGT CCTGGCCGAT CGACAACCTC GGCGAACTGG CCAAGTGCAA GGCTTCGGCG
GACCGGGTGG CCAGCCTCTA CAACGACATG CTGCAACTGG AGGAACGCGA GCGACTGCCG
GTGGAGCACC GCATCGAGCT GGGCCACGGG CGGGCCAACG AACTGGTGTT CCGCGACCTG
TGCCTGGCCA ATCCGGACGG CGAGATCCTG GTCGAACGTC TCGACGCCAC CATCCACCGC
GGCGAACGGG TGCTGATCGC CGGCGACCCG GCGGTGACCA TCGGCCTGTT CAAGGCGGTG
GCCGGCCTCT GGCCCTGGGG CAACGGCAAG ATCCTGCTGC CCGACGACGC CGGCGTGGTG
TTCCTCTCGC AGCACCCCTT CCTGCCCGAC GGCAGCCTGG AAGCGGTGCT CAGCTACCCG
CGCGAACCCG GCCATTTCAG CCGGGCGGAA CTGCACCACG CGCTCGAATG CGCCGGGGTG
ACCTGGCTGG CCCCGCGCCT CGCGGAGATC GACAGCTGGA GCCGGGTGCT GCCGCTGCGG
GCCCAGCAGT GCCTGGGCAT CGCCCGGCTT ATCCTGCACC AGCCGCCCTG GGTGTTCCTC
GAAGAGGCCA CCGACGCCTT CGATCCCAAG GGCGAGGACT ACATGCTGGA GATGCTCTGT
CGCGAGCTGC CCGACTCGAC CCTGCTGACC ATCAGCTTCC ACCCGGGGCT GGAGCCCCAC
CACACGCGGA AGCTGATTCT CAACCGCCAG GCCGAACCGC GCTTTCTCTC CTGCGCCAGC
GAGCTGTGCG CGCTACGCAA AGGATGA
|
|---|
| Protein sequence | MPMSQSNPRA LPLRWQFVHL VKPYWNSERK WLVRGTVGLL LLLTLAQVGL AIWTSYWHRE
LFDALEARSL DTLLLQIATF ALIFALTMLV TALHLHVKRR LQLDWRQWLT LKLLDQWLTH
AHHYKLQFTS GEHDNPDGRI AEDIRIATEN AITLAHSLVF SLLILGTFVD ILFKLSGSLA
LPGTDIVIPG FLVLLAFLYA SGGSLLGLLL GRPLTQSTNR LQTVEANLRF GLARARENSE
SIALMHGEGI ERAYAGRLFA DVGQGWNRQT VGYLGIVSFS AGYGALLPVF PILVAAPQYI
AGTMSLGVLM QAAQAFQRLT SALSWPIDNL GELAKCKASA DRVASLYNDM LQLEERERLP
VEHRIELGHG RANELVFRDL CLANPDGEIL VERLDATIHR GERVLIAGDP AVTIGLFKAV
AGLWPWGNGK ILLPDDAGVV FLSQHPFLPD GSLEAVLSYP REPGHFSRAE LHHALECAGV
TWLAPRLAEI DSWSRVLPLR AQQCLGIARL ILHQPPWVFL EEATDAFDPK GEDYMLEMLC
RELPDSTLLT ISFHPGLEPH HTRKLILNRQ AEPRFLSCAS ELCALRKG
|
|---|
| |