Gene Avin_07050 details

Gene Information

• Locus tag: Avin_07050
• Symbol: speA
• ID: 7759658
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 668637
• End bp: 670547
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643803626
• Product: arginine decarboxylase
• Protein accession: YP_002797930
• Protein GI: 226942857
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1166] Arginine decarboxylase (spermidine biosynthesis)
• TIGRFAM ID: [TIGR01273] arginine decarboxylase, biosynthetic

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTCGAC GTACACGCAA GGACGACGGC AGCCAGTGGA CCGTGGCCGA CAGCCGCGCC 
GTCTACGGCA TCCGTCACTG GGGTGCCGGT TATTTCGCGA TCAACGAGCG GGGCCACGTG 
GAGGCCCGGC CGAACCGCGC CGCCGACCGG CCGGTCGATC TCGTCGAACT GCTCGGCCAG 
TTGCGCGAGG CCGGCCTGTC GCTGCCGTTG CTGGTGCGTT TCCCGGACAT CCTGCAGGAC 
CGCGTGCGCC AGTTGACCAG TGCCTTCGAT GCGAACATCG CGCGCCTCGG CTACCAGAGC 
GGCTACACCG CGCTGTACCC GATCAAGGTT AACCAGCAGG AAGCGGTGGT GGAGAGCATC 
ATCGCCACGG CGAACGTCTC CATCGGCCTG GAGGCCGGCT CCAAGCCGGA GCTGCTCGCC 
GTGCTGGCGC TGGCGCCGAA AGGCGGCACC ATCGTCTGCA ACGGCTACAA GGACCGCGAA 
TTCATTCGCC TGGCGTTGAT CGGCCAGAAA CTCGGCCACT CGGTGTTCAT CGTCGTCGAG 
AAGGAATCGG AAGTGCAACT GATCATCGAG GAGGCGGCCG AACTCCGGGT CGTCCCGCAG 
CTCGGCCTGC GCGTGCGGCT GTCCTCGCTG ACTTCCTCGA AATGGGCCGA TACCGGCGGC 
GAGAAGGCCA AGTTCGGCCT CTCCGCGGCG CAACTGCTGC GCGTGGCCGA ACGCCTGCGC 
GACGCCGGGC TGGAGCAGGG GGTACGCCTC CTGCACTTCC ACATGGGCTC GCAGATCGCC 
AACCTGGCCG ATTACCAGGG CGGCTTCAAG GAAGCCATCC GCTACTACGC CGAACTGCGC 
GCCCTCGGCC TGCCCCTCGA CCACGTGGAC GTCGGCGGTG GCCTGGGCGT CGATTACGAC 
GGCACCCATT CGCGCAATCC CAGCTCGATC AACTACGACA TGGACGATTA CGCCGCCACC 
GTGGTCGGCA TGCTCCAGGA GTTCTGCGAT GCCCAGGGCC TGCCGCATCC GCACATTTTT 
TCGGAGAGCG GCCGCGCCCT GAGCGCGCAT CACGCGATGC TGGTGGTGCA GGTCACCGAC 
GTGGAGCGCC ACAACGACCA GTTGCCGGAG ATCAACGATC CGCAGCGTCT GCCGGAGACG 
CTGCGCTGGC TGATCGAACT GCTCGGCCCG ACCGATGACG AGATGGTCAC CGAGACCTAC 
TGGCGCGCCA CCCAGTACTT GGGCGAACTG TCGCGCATGT ATGCCGACGG CAAGCTGGGC 
CTGGCCGACA AGGCGCTCGC CGAGCAGTGC TACTACGCGC TCTGCCGGCG CCTGCACGAC 
TCGCTGAAGG CCCGCCAGCG CTCCCACCGC CAGGTGCTCG ACGAACTCAA CGACAAGCTG 
GCGGACAAGT ACATCTGCAA CTTCTCGGTG TTCCAGAGCC TGCCGGACAC CTGGGCGATC 
GGTCAGGTCC TGCCGATCCT GCCGCTCGAC CGGCTCGACG AGGAGCCGCT GCGCCGCGCG 
GTGCTGCAGG ACCTGACCTG CGACTCCGAC GGCAAGATCA AGCAGTACGT CGACGAGCAG 
AGCATCGAGA CCAGCCTGCC GGTGCATGAG CTGCGCGCGG GCGAGGAGTA CCTTTTGGGC 
ATCTTCCTGG TTGGTGCCTA TCAGGAGATC CTCGGCGACA TGCACAACCT GTTCGGCGAC 
ACCGACTCGG TGAACGTCTA CCAGCGCGCC GACGGCAGCA TCTACCACGC CGGCATCGAA 
ACCCACGACA CCATCGAGGA CATGCTGCGC TACGTGCACC TGTCGCCCGA GGAACTGATG 
ACCTACTACC GCGACAAGGT GGCCGGCGCG CCCATCAGCG CCCGCGAACG CGCCCAGTAC 
CTCGATGCCC TGCGCCTGGG GCTGACGCGC TCGTCCTACC TGTCGGGCTG A 

 

Protein sequence

MARRTRKDDG SQWTVADSRA VYGIRHWGAG YFAINERGHV EARPNRAADR PVDLVELLGQ 
LREAGLSLPL LVRFPDILQD RVRQLTSAFD ANIARLGYQS GYTALYPIKV NQQEAVVESI 
IATANVSIGL EAGSKPELLA VLALAPKGGT IVCNGYKDRE FIRLALIGQK LGHSVFIVVE 
KESEVQLIIE EAAELRVVPQ LGLRVRLSSL TSSKWADTGG EKAKFGLSAA QLLRVAERLR 
DAGLEQGVRL LHFHMGSQIA NLADYQGGFK EAIRYYAELR ALGLPLDHVD VGGGLGVDYD 
GTHSRNPSSI NYDMDDYAAT VVGMLQEFCD AQGLPHPHIF SESGRALSAH HAMLVVQVTD 
VERHNDQLPE INDPQRLPET LRWLIELLGP TDDEMVTETY WRATQYLGEL SRMYADGKLG 
LADKALAEQC YYALCRRLHD SLKARQRSHR QVLDELNDKL ADKYICNFSV FQSLPDTWAI 
GQVLPILPLD RLDEEPLRRA VLQDLTCDSD GKIKQYVDEQ SIETSLPVHE LRAGEEYLLG 
IFLVGAYQEI LGDMHNLFGD TDSVNVYQRA DGSIYHAGIE THDTIEDMLR YVHLSPEELM 
TYYRDKVAGA PISARERAQY LDALRLGLTR SSYLSG