Gene Avin_06970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_06970 
SymbolaroQ 
ID7759650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand- 
Start bp661712 
End bp662155 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content65% 
IMG OID643803618 
Product3-dehydroquinate dehydratase 
Protein accessionYP_002797922 
Protein GI226942849 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.554011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCACCC TACTGGTGCT GCACGGCCCC AACCTCAACC TGCTGGGCAC CCGCGAACCC 
GGCGTGTACG GCGCCACCAC CCTCGCGCAG ATCGACCAGG ACCTGGAACG CCGCGCCAGC 
AAGGCCGGCC ATCGCCTGCT CCACCTGCAG AGCAACGCCG AGCACGTCCT GATCGAACGC 
ATCCATGCCG CCCGCCAGGA GGGCGTGAGC TATATCATCT TCAATCCGGC GGCTTTCACC 
CATACAAGTG TCGCCCTGCG TGACGCATTG CTGGCGGTGA GCATCCCATT CATCGAAGTG 
CACCTGTCCA ACGTGCACAA ACGCGAGCCC TTCCGTCATC ACTCCTACTT CTCCGACATC 
GCCGTAGGGG TGATCTGCGG CCTGGGCGCC AGCGGCTACC GGCTGGCCCT CGAGGCCGTC 
CTCGAACAAC TTGAACGTCC CTGA
 
Protein sequence
MATLLVLHGP NLNLLGTREP GVYGATTLAQ IDQDLERRAS KAGHRLLHLQ SNAEHVLIER 
IHAARQEGVS YIIFNPAAFT HTSVALRDAL LAVSIPFIEV HLSNVHKREP FRHHSYFSDI 
AVGVICGLGA SGYRLALEAV LEQLERP