| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_06910 |
|---|
| Symbol | |
|---|
| ID | 7759644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 656409 |
|---|
| End bp | 657377 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643803612 |
|---|
| Product | Dihydrouridine synthase |
|---|
| Protein accession | YP_002797916 |
|---|
| Protein GI | 226942843 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0042] tRNA-dihydrouridine synthase |
|---|
| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.888077 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCCAACC GATTGATCCT GGCGCCCATG GCCGGTGTCA CCGATCGACC GTTTCGCGCG
CTGTGCCGCC GGCTCGGCGC CGGCATGACG GTTTCGGAAA TGCTCACCAG CGACGTTCGC
CTGTGGAACA GCCGCAAGTC GCGCCTGCGC CTGCCGCACG GCGACGAGCC GGAACCGCGC
TCGGTGCAGA TCGCTGGCGG CGACCCGCAG CGGCTCGCCG AGGCGGCCCG GCGCAACGTG
GAACTGGGCG CGCAGATCAT CGACATCAAC ATGGGCTGTC CGGCGAAGAA GGTCTGCAAC
AAAGCCGCCG GCTCGGCGCT GATGCGCGAC GAGGCGCTGG TCGCCGAGAT CCTCCGGGCG
GTGGTGACCG CCGTCGAGGT CCCGGTGACC CTGAAGATCC GCACCGGCTG GGACCGGGCC
AACCGCAACG GGGTCGGCAT CGCCCGGCTC GCCGAGCAGG CCGGCATCGC CGCCCTCGCC
GTGCATGGCC GGACCCGTGC CGACCTCTAC GGCGGCGCGG CCGAATACGA CACCATTGCC
GCCATCAAGC GGGCGGTATC GATTCCGGTG TTCGCCAACG GCGACATCGA CTCGCCGGAA
AAGGCCCGCC AGGTGCTCGA CGCCACCGGT GCCGACGGCC TGCTGATCGG CCGTGCGGCC
CAGGGGCGGC CATGGATCTT CCGCGAGATT GAGCACTACC TGCGAACCGG CGAGCGCCTG
CCGGCGATGA CGGCGCTCGA GGTGGAGCCC GTTCTGCTGG AGCACTTGGC CGCACTGTAC
CGTTTCTACG GGGAGGAGCT GGGCGTTCGC ATCGCCCGCA AGCACGTCGG CTGGTACCTG
GCGAGCCTGC CGGGCGCGCA GGAGTTTCGA GCCCAGTTCA ACCGCTTGGA TACCACGGAC
GCACAGAGCG CCCACGTGCG GCGATTCTTC GCCGAACGTC ACAAAGATGG AGAAGGGGTG
GCCGCATGA
|
|---|
| Protein sequence | MPNRLILAPM AGVTDRPFRA LCRRLGAGMT VSEMLTSDVR LWNSRKSRLR LPHGDEPEPR
SVQIAGGDPQ RLAEAARRNV ELGAQIIDIN MGCPAKKVCN KAAGSALMRD EALVAEILRA
VVTAVEVPVT LKIRTGWDRA NRNGVGIARL AEQAGIAALA VHGRTRADLY GGAAEYDTIA
AIKRAVSIPV FANGDIDSPE KARQVLDATG ADGLLIGRAA QGRPWIFREI EHYLRTGERL
PAMTALEVEP VLLEHLAALY RFYGEELGVR IARKHVGWYL ASLPGAQEFR AQFNRLDTTD
AQSAHVRRFF AERHKDGEGV AA
|
|---|
| |