| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_06710 |
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| Symbol | ribD |
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| ID | 7759625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 638516 |
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| End bp | 639601 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643803593 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_002797897 |
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| Protein GI | 226942824 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCGTG CCCTGGAGCT GGCCCGCCAG GGACTGTATT CCACCCACCC CAATCCGCGG
GTCGGCTGCG TGATCGTCGC CGCCGGCAGG ATCGTCGGCG AAGGCTGGCA CGTGCGCGCC
GGCGAGCCGC ACGCCGAGGT CCACGCCCTG CGCCAGGCCG GTGAGACGGC GCGCGGTGCC
ACCGCCTACG TCACCCTGGA GCCCTGCAGC CACCACGGGC GCACGCCACC CTGCGCCGAG
GCGCTGGTCG CCGCCGGGGT CGGTCGGGTG GTGGCGGCCA TGCAGGACCC CAATCCGCAG
GTGTCCGGGC GCGGCCTGGC GCGTCTGCGC CAGGCCGGTA TCGAGGTCGA GGTCGGTGTG
CTGGAGGCCG AGGCGCGTGC GCTCAACGCC GGTTTCGTCA AGCGCATGGA GCACGGTCTG
CCGTTGGTAC GGGTCAAGTT GGCGATGAGC CTGGACGGCC GCACGGCGAT GGCCAGCGGC
GAGAGCCAGT GGATCACCGG CGCGCCGGCG CGCGCCGCCG TGCAGCGCCT GCGCGCCCGT
TCCAGCGTGG TGCTGACCGG CGCCGACACC GTTCTCGTCG ACCATGCCCG GCTCACCGTG
CGCGGCGAGG AGCTGGGGCT GGCGCCCGAA CAGGTCGCCC TGGCGCTGCA GCGTCCGCCG
CTGCGCGTGC TGGTCGACGG GCGCCTGCGG GTGCCGCTGG ATGTGCCCTT CTTCCAGGCC
GGGCCGGCGC TGGTGGCGAC TGTTTCGGCC GAACGCGAGG TGGATTACCG GGCGGCCGGC
CACGAGTTGC TGGCCGTGCC GGGCGAGGAC GGCCGGGTCG ATCTGCCGGC GCTGCTGGCC
GAGCTGGCCG CGCGTGGGGC CAACGAGGTG CTGGTGGAGG CCGGTCCGCG TCTGGCCGGG
GCCTTCGCCC GGCAGGGACT GGTCGACGAG TACCGTCTGT TCGTCGCGCC CAAGTTTCTC
GGCTCGACTG CCCGGCCCCT GCTGGAGCTG CCCCTGGAGC GCATGGCCGA GGCGCGCGAG
CTGAAGATCC GCGACATCCG CGCGGTGGGC GAGGATTGGC AGATCGTCGC CGTGCCCGCG
ACCTGA
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| Protein sequence | MARALELARQ GLYSTHPNPR VGCVIVAAGR IVGEGWHVRA GEPHAEVHAL RQAGETARGA
TAYVTLEPCS HHGRTPPCAE ALVAAGVGRV VAAMQDPNPQ VSGRGLARLR QAGIEVEVGV
LEAEARALNA GFVKRMEHGL PLVRVKLAMS LDGRTAMASG ESQWITGAPA RAAVQRLRAR
SSVVLTGADT VLVDHARLTV RGEELGLAPE QVALALQRPP LRVLVDGRLR VPLDVPFFQA
GPALVATVSA EREVDYRAAG HELLAVPGED GRVDLPALLA ELAARGANEV LVEAGPRLAG
AFARQGLVDE YRLFVAPKFL GSTARPLLEL PLERMAEARE LKIRDIRAVG EDWQIVAVPA
T
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