| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_06520 |
|---|
| Symbol | uvrA |
|---|
| ID | 7759606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 620747 |
|---|
| End bp | 623581 |
|---|
| Gene Length | 2835 bp |
|---|
| Protein Length | 944 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643803574 |
|---|
| Product | excinuclease ABC subunit A |
|---|
| Protein accession | YP_002797878 |
|---|
| Protein GI | 226942805 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0178] Excinuclease ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGACAAGA TCCTGATCCG TGGGGCGCGC ACCCACAACC TGAAGAACAT CGACCTGACC
CTGCCGCGCG ACAAACTGAT CGTTATCACC GGCCTGTCCG GTTCCGGCAA ATCCTCGCTG
GCCTTCGACA CCCTCTATGC CGAAGGCCAG CGCCGCTACG TGGAGTCCCT CTCGGCCTAC
GCCCGGCAAT TCCTGTCGAT GATGGAAAAG CCCGATGTCG ACGCCATCGA GGGTCTTTCG
CCGGCGATTT CCATCGAGCA GAAATCGACT TCGCACAACC CGCGCTCCAC CGTCGGCACC
ATTACCGAGA TCTACGACTA CCTGCGCCTG CTCTACGCGC GTGTCGGCAC CCCACGCTGC
CCGGAACACG ACGTGCCGCT GGAAGCGCAG ACCGTCAGCC AGATGGTCGA CCAGGTGCTC
GCGCTGCCGG AAAGCAGCAA GCTGATGCTA TTGGCCCCGG TGGTCCGCGA GCGCAAGGGC
GAACACCTCT CGATCTTCGA GGAGTTGCGT GCCCAGGGGT TCGTCCGCGC ACGAGTCGAC
GGCAGGCTTT TCGAACTGGA CGAGCTGCCC AAGCTGGACA AGCAGAAGAA GCACAGCATC
GACGTGGTGG TGGATCGCTT CAAGGTACGC GACGACTTGC AGCAGCGCCT GGCCGAGTCC
TTCGAGACCG CGCTGAAGCT GGCCGACGGC ATCGCCCTGG TGGTACCGAT GGAGGGCGAG
ACGGGCGACG AGTTGATCTT CTCCGCACGC TTCGCCTGCC CCCACTGCGG ACACTCGATC
GGCGAGCTGG AGCCCAAGCT GTTCTCCTTC AATAACCCGG CCGGCGCCTG CCCCTCCTGC
GACGGCCTTG GCGTCAAGCA GTACTTCGAC CCGCGCCGGC TGGTCAACGG CAAGCTGTCT
CTCGCCGAGG GCGCGATCCG CGGCTGGGAC AGGCGCAACG TCTACTATTT CCAGATGCTC
GGTTCGCTGG CCGCACACTA CGGCTTCAGC CTCGAAGAGC CGTTCGAGAA CCTGCCGGCC
AGCGTGCAGA AGGCCCTGTT GCACGGCAGC GGCCGCGAGA GCATCGAGTT CCGCTATCTC
AACGACCGCG GCGACATCGT GGTCCGGGCC CATCCGTTCG AGGGCATCAT TTCCAACCTG
GAACGCCGCT ACCGCGAAAC CGAATCCGCC AGCGTGCGCG AGGAACTGGC CAAGCTGCTC
AGCAGCCAGC CCTGCCCCGA CTGCCGCGGC ACCCGCCTGC GCCGCGAGGC GCGGCACGTC
TGGGTCGGCG AAAAGACCCT GCCGGCGGTC ACCGCCCTGC CGGTGGGTGA AGCCTGTGGC
TATTTCGCCG GCTTGTCGCT GAGCGGTCGA CGCGGCGAGA TCGCCGGGAA GATCCTCAAG
GAGATCCGCG AGCGCTTGCA GTTTCTGGTC AACGTCGGCC TCGACTACCT GACTCTGGAT
CGCAGCGCCG ATACCCTTTC CGGCGGCGAG GCGCAGCGCA TCCGCCTGGC CAGCCAGATC
GGCGCCGGCC TGGTCGGGGT GATGTACATC CTCGACGAGC CTTCCATCGG TCTGCACCAG
CGCGATAACG AGCGCCTGCT GGCTACCCTC ACCCACCTGC GCAACCTGGG CAACACAGTG
ATCGTGGTGG AGCACGACGA GGATGCCATC CGCCTGGCCG ACTATCTGGT CGACATCGGC
CCGGGCGCCG GCGTGCACGG TGGGCAAATC GTCGCCGAGG GTGCACCGGC CGAGGTGATG
GCCCATCCCG ACTCGTTGAC CGGCAAATAC CTCTCCGGCC GCCTGAAGAT CGAAGTTCCG
GCCGCACGCA CCCCGCGCGA TGTCAAACGG CTCCTCAAGC TCAAGGGGGC CCGCGGCAAC
AACCTGCAGA ATGTCGACCT GGAGATCCCG GTGGGCCTGT TCACCTGCAT CACCGGAGTG
TCCGGGTCGG GCAAGTCGAC CCTGATCAAC AACACCCTGT TTCCTCTCAC CGCCATGGCG
CTGAACGGCA GCAGTGGTCT GGAAACCGCC CCCCACGACA GCTTCGACGG CTTGCAGCAC
CTGGACAAGG TGGTCGACAT CGACCAGAGC CCGATTGGCA GAACGCCACG CTCGAACCCG
GCGACCTACA CCGGACTGTT CACCCCCATC CGCGAACTGT TCGCCGGTGT GCCGGAGTCA
CGCTCGCGCG GCTACAACCC CGGGCGCTTT TCCTTCAACG TCAAGGGCGG TCGCTGCGAG
GCTTGCCAGG GCGACGGCGT GATCAAGGTG GAGATGCATT TTCTGCCGGA CATCTACGTT
CCCTGCGACG TCTGCAGGGG CAAGCGCTAC AACCGCGAAA CGCTCGAGGT GAAGTACAAG
GGCAAGAACA TCCACGAAGT GCTGGAGATG ACCATCGAGG AAGCCCGCGA CTTCTTCGAT
GCCGTACCGG CGATAGCGCG CAAGCTGCAG ACGCTCATCG ACGTCGGCCT CTCCTACATT
CGCCTGGGCC AGAGCGCCAC GACCCTGTCC GGCGGCGAGG CGCAGCGGGT CAAGCTGAGC
CGCGAACTGT CGAAACGGGA TACCGGCAAG ACCCTGTACA TCCTCGACGA GCCCACCACG
GGCCTGCACT TCGCCGATAT CCAGCAACTC CTGGACGTAC TGCATCGACT GCGCGACCAC
GGCAACACCG TGGTGGTGAT CGAGCACAAC CTGGATGTGA TCAAGACCGC CGACTGGATC
GTCGACCTGG GCCCCGAAGG CGGCTCGCGG GGCGGCCGGA TCATCGCCGT CGGCACGCCC
GAGCAGGTCG CGCAGATGCC GCAATCGCAC ACCGGACGCT TCCTCGCGCC CCTGCTGGAG
CGCGATCGCG CCTGA
|
|---|
| Protein sequence | MDKILIRGAR THNLKNIDLT LPRDKLIVIT GLSGSGKSSL AFDTLYAEGQ RRYVESLSAY
ARQFLSMMEK PDVDAIEGLS PAISIEQKST SHNPRSTVGT ITEIYDYLRL LYARVGTPRC
PEHDVPLEAQ TVSQMVDQVL ALPESSKLML LAPVVRERKG EHLSIFEELR AQGFVRARVD
GRLFELDELP KLDKQKKHSI DVVVDRFKVR DDLQQRLAES FETALKLADG IALVVPMEGE
TGDELIFSAR FACPHCGHSI GELEPKLFSF NNPAGACPSC DGLGVKQYFD PRRLVNGKLS
LAEGAIRGWD RRNVYYFQML GSLAAHYGFS LEEPFENLPA SVQKALLHGS GRESIEFRYL
NDRGDIVVRA HPFEGIISNL ERRYRETESA SVREELAKLL SSQPCPDCRG TRLRREARHV
WVGEKTLPAV TALPVGEACG YFAGLSLSGR RGEIAGKILK EIRERLQFLV NVGLDYLTLD
RSADTLSGGE AQRIRLASQI GAGLVGVMYI LDEPSIGLHQ RDNERLLATL THLRNLGNTV
IVVEHDEDAI RLADYLVDIG PGAGVHGGQI VAEGAPAEVM AHPDSLTGKY LSGRLKIEVP
AARTPRDVKR LLKLKGARGN NLQNVDLEIP VGLFTCITGV SGSGKSTLIN NTLFPLTAMA
LNGSSGLETA PHDSFDGLQH LDKVVDIDQS PIGRTPRSNP ATYTGLFTPI RELFAGVPES
RSRGYNPGRF SFNVKGGRCE ACQGDGVIKV EMHFLPDIYV PCDVCRGKRY NRETLEVKYK
GKNIHEVLEM TIEEARDFFD AVPAIARKLQ TLIDVGLSYI RLGQSATTLS GGEAQRVKLS
RELSKRDTGK TLYILDEPTT GLHFADIQQL LDVLHRLRDH GNTVVVIEHN LDVIKTADWI
VDLGPEGGSR GGRIIAVGTP EQVAQMPQSH TGRFLAPLLE RDRA
|
|---|
| |