Gene Avin_06470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_06470 
SymbolrpsM 
ID7759601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp617619 
End bp617975 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content59% 
IMG OID643803569 
Product30S ribosomal protein S13 
Protein accessionYP_002797873 
Protein GI226942800 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCGTA TCGCAGGCGT CAACATTCCG GATAACAAGC ATACTGTTAT CTCGCTGACC 
TACATCTATG GTGTCGGTCG TACCACTGCA CAGGCTATCT GTGCCGCTAC CGGTGTCAAT
CCGGCAGCAA AGATCAAGGA TCTCTCGGAC GAGCAGATCG AGCAGCTGCG TGGCGAAGTG
GCCAAGCTCA CCACTGAAGG TGATCTGCGC CGTGAAGTCA ACATGAAAAT CAAGCGTCTG
ATGGACCTGG GCTGCTATCG CGGCCTGCGT CACCGCCGTG GCCTGCCGGT TCGCGGTCAG
CGCACCAAGA CCAACGCCCG TACCCGCAAG GGCCCGCGCA AGCCGATCCG CAAGTAA
 
Protein sequence
MARIAGVNIP DNKHTVISLT YIYGVGRTTA QAICAATGVN PAAKIKDLSD EQIEQLRGEV 
AKLTTEGDLR REVNMKIKRL MDLGCYRGLR HRRGLPVRGQ RTKTNARTRK GPRKPIRK