Gene Avin_06400 details

Gene Information

• Locus tag: Avin_06400
• ID: 7759594
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 614071
• End bp: 614529
• Gene Length: 459 bp
• Protein Length: 152 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 643803562
• Product: 50S ribosomal protein L6
• Protein accession: YP_002797866
• Protein GI: 226942793
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0011591
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGGGGG CGAAAGGCTC TCTCGAATTG AATGTGCATC CCTCGGTCGA GGTCGTTCAG 
GAGGCTGGCG AGCTGCGTTT TGCTGCCCGT AATGGCGATC AGCAGAACAG AGCCATGGCC 
GGCACCACCC GTGCACTTGT CAACAACATG GTGATTGGCG TCAGCCAGGG CTTCGAGCGC 
AAGCTGCAGC TGGTCGGCGT TGGTTACAAA GCGCAGGCCA AGGGGCAAGT CCTGTCCCTG 
GCGCTTGGTT TCTCCCATCC GGTGGATTAT CAGTTGCCGC AGGGCATCAC TGCGGAAACT 
CCCAGCCAGA CCGATATCCT GATCAAGGGG ATCGACAAGC AACTGGTTGG CCAGGTGGCA 
GCCGAGATTC GCGATTTCCG TCGTCCCGAG CCGTACAAAG GCAAAGGGGT GCGGTATTCC 
GACGAAGTGG TCCATCGCAA AGAAGCCAAG AAAAAGTAG 

 

Protein sequence

MKGAKGSLEL NVHPSVEVVQ EAGELRFAAR NGDQQNRAMA GTTRALVNNM VIGVSQGFER 
KLQLVGVGYK AQAKGQVLSL ALGFSHPVDY QLPQGITAET PSQTDILIKG IDKQLVGQVA 
AEIRDFRRPE PYKGKGVRYS DEVVHRKEAK KK