| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_05910 |
|---|
| Symbol | |
|---|
| ID | 7759547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 570423 |
|---|
| End bp | 572360 |
|---|
| Gene Length | 1938 bp |
|---|
| Protein Length | 645 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643803511 |
|---|
| Product | cyclic nucleotide-binding protein |
|---|
| Protein accession | YP_002797819 |
|---|
| Protein GI | 226942746 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0914238 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGA CGGACGCTTT CGCCGAAGCC GGCAAGACCG CAGTCATGCA GAACATCCAG
GGCACCATGC AGTTCCTCCT CCAGTTCCCG CCGTTCGACC AGATGGAAAG CGGCCATCTG
GCCTATCTGG TGGAACATTG CCGGCTGCGC TTCTACGCGG CGGGCGACTC CATCGTCAAG
CCGGCGGACG GGCGGGTCGA GCACCTGCAC ATCGTCAAGC AGGGCCATGT CCTCGGCCAG
CGTCCCAGCC TCTCCGGCAA CGGCATCGAC ACCACCATGG AGATCGCTCC GGGCGAATGC
TTCCCGATGG CGGCGATGGT CGGCGAGCGG CCGACCCGCA CCGACTACAT CGCCGCCGAG
GACAGCTTCT GCCTGCTCCT CGAACGCCAG GCCTTCGCCA GGCTGCTGAC CGACTCCGAC
CCGTTCCGCG ACTTCGCCCT GCGCGGAGTC AGCAGCCTGC TCGACCTGGT CAACCAGCAG
GTCCAGCTCA AGGCCGCGAA AACCCTCGGC GCGCAGTACT CGCTGGATAC CCGCCTCGGC
GAACTGACCG CGCGCCGCCC GGTCTTCTGC ACCGGCGGCA CCAGCCTGCG CGAGGCGGTG
CGGCTGATGA ACGAGCACCA GGTCGGCAGC CTGGTGATGG TCGATGCGGC CGAGTTCCCG
GTCGGCATCT TCACCCTGCG CGACCTGCGC CAGGTGATCG CCGAGGGTAG CGGCGACCTC
GAACAGCCGC TGGACGAACT GATGGTCCGC GACCCGGCCC GCCTGCCGCC CTCGGCCACC
GCCTTCGACG CCGCGCTGAC CATGACCCGG CGGCACATCG CGCACATCTG CGTGGTGGAG
AACGACCGCC TGGTGGGGGT GATCTCCGAG CGCGACCTGT TCTCCCTGCA GCGCGTCGAC
CTGGTGCACC TGGCGCGCAC CATCAGCAGC GCCGGCAGCG TGGCCGCCCT GGCCGCCCTG
CGCGGCGACA TCGCCCGGCT GATCGACCAC ATGCTCGCCC ACGGTGCCAG CCCGGCGCAG
TTGACCCATA TCATCACCCA ACTCAACGAC CACACCGTGA GCCGGGTGAT CGAGCTGATG
CTGGAAAAGC ACGGCGATCC GGGCGTGCCC TTCACCTGGC TGGCGTTCGG CAGCGAGGGG
CGTCGCGAGC AGACGCTGCA CACCGACCAG GACAACGGCA TCCTCTTCGA GGCAGCCGGC
CAGGCCGAGG CCGAGACCAT CCGCCAGCGC CTGCTGCCGC TGGCCCGCGA GATCAACCTG
GCGCTGGATG CGTGCGGCTT CAGCCTGTGC AAGGGCAACG TCATGGCCGG CAACCCCGAA
CTCTGCCTGT CGCGCCAGGA GTGGCTGCGT CGCTTCGGCG GCATCATCCA GTCGCCGAGC
GCCGAGAACC TGCTGCGCTC GACCATCTTC TTCGACCTGC GCCCGGTCTG GGGGCCGACC
CGACACTGCC GCGAGCTGCT CGACGACCTG CTGGAAATGA TCGCCGACAA CGCCCTGTTC
CAGCGCATGA TGGCCGCCAA CGCCATGCAG CATCGACCGC CGATCGGCCG CTTCCTGCGC
GACTTCGTGG TGGCCAGCCA CGGCGCCGAG AAGGACACCC TGGACCTCAA GGTGGAAGGC
CTGACGCCCT TCGTCGACGG CGCGCGCATC CTCGCCCTGG CCAACGGCAT CCACGACAGC
AACACCCTCG AACGCTTCCG GCAACTGGCG GCCAGGGGGG TGATCGATCC CAAGGACGCG
GCATCCTACG AGGAGGCCTA CCACTTCATC CAACTGATGC GCATGCAGCA CCACCAACGC
CAGCAGCACG AAGGCCGCCC GCTCGGCAAC CGCCTCGACC CCGATACCCT CAACAGCCTC
GACCAGCGCA TACTGCGGGA GTCCTTCCGC CAGGCGCAGC GCCTGCAGAG CCGACTGAGC
GTGCGATACC AGCTTTGA
|
|---|
| Protein sequence | MSKTDAFAEA GKTAVMQNIQ GTMQFLLQFP PFDQMESGHL AYLVEHCRLR FYAAGDSIVK
PADGRVEHLH IVKQGHVLGQ RPSLSGNGID TTMEIAPGEC FPMAAMVGER PTRTDYIAAE
DSFCLLLERQ AFARLLTDSD PFRDFALRGV SSLLDLVNQQ VQLKAAKTLG AQYSLDTRLG
ELTARRPVFC TGGTSLREAV RLMNEHQVGS LVMVDAAEFP VGIFTLRDLR QVIAEGSGDL
EQPLDELMVR DPARLPPSAT AFDAALTMTR RHIAHICVVE NDRLVGVISE RDLFSLQRVD
LVHLARTISS AGSVAALAAL RGDIARLIDH MLAHGASPAQ LTHIITQLND HTVSRVIELM
LEKHGDPGVP FTWLAFGSEG RREQTLHTDQ DNGILFEAAG QAEAETIRQR LLPLAREINL
ALDACGFSLC KGNVMAGNPE LCLSRQEWLR RFGGIIQSPS AENLLRSTIF FDLRPVWGPT
RHCRELLDDL LEMIADNALF QRMMAANAMQ HRPPIGRFLR DFVVASHGAE KDTLDLKVEG
LTPFVDGARI LALANGIHDS NTLERFRQLA ARGVIDPKDA ASYEEAYHFI QLMRMQHHQR
QQHEGRPLGN RLDPDTLNSL DQRILRESFR QAQRLQSRLS VRYQL
|
|---|
| |