| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_05690 |
|---|
| Symbol | |
|---|
| ID | 7759525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 547595 |
|---|
| End bp | 549769 |
|---|
| Gene Length | 2175 bp |
|---|
| Protein Length | 724 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643803489 |
|---|
| Product | Integral membrane protein, YccS/YhfK family |
|---|
| Protein accession | YP_002797797 |
|---|
| Protein GI | 226942724 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1289] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR01666] hypothetical membrane protein, TIGR01666
[TIGR01667] integral membrane protein, YccS/YhfK family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTCGA CTCCGTTCAG CCAGTCCCTC CGCCAGCTCT GGGCCCATCA TGTCTTCAGT
TACAGCCTGC GGGTGTTCAT CGCTCTCACC GGCAGCATGG CGCTGTGCTG GGTCCTGGAT
CGCATGGACC TGCTCATCCC GCTGTTCCTC GGCATCATCG CCAGCGCCCT GGCGGAAACC
GACGACAGTT GGGAGGGCCG GCTGCAGGCC TTGCTGGTGA CCCTGGCGTG CTTCGCCGCC
GCGGCCTTCG CCGTGGAGTT GCTGTTCCCC TATCCCTGGA AGTTCGCCGC CGCCCTGGCG
CTGTCCAGCT TCGGCCTGAC CATGCTCGGG GCCCTGGGCG AGCGCTATGC CACCATCGCT
TCGGGCACCT TGATCCTGTC GATCTATACC ATGATCGGCA TCGACCAGCG CGGCGGGCCG
CCGGTCGATC TGTGGCGCGA GCCCTTGGTG CTGGTCGCCG GCGCCGCCTG GTACGGCGTG
CTCTCGGTGA TCTGGCAGGC GCTGTTCAGC ACCCAGCCGA TCCAGCAGAG CCTGGCCCGG
GTGTTCCGCG AGCTGGGCGA GTACCTGAAG CTCAAGGCGT CGCTGTTCGA GCCGGTGCGC
CACCTCGACG TGGGGCAGCG CCGCCTGGAG CTGGCGCAGC GGAACAGCCG GGTGGTGGCC
GCGCTGAACG CCGCCAAGGA GATCATCCTG CACCGGGTCG AGAACGGCCG GCCGTCGCCG
CAGGTGAACC GCTACCTGAA GCTGTACTTC CTCGCCCAGG ACATCCACGA GCGCGCCAGC
TCCTCGCACT ATCCCTACAA CGCGCTGGCC GAGGCCTTCT TCCACAGCGA CGTGCTGTTC
CGCTGCCGCC TGGTGATCCG CCAGCAGGGC AAGTCCTGTC TGGCCCTGGC GCGGGCCATC
GAACTGCGCC AGCCGTTCGA CTGCATCGAT CAGAGCCAGG CCCTCGAGGA CCTGCACACC
TCGCTGGCTC ACCTGCGGAT GCAGAGCAAT CCGGCTTGGC GCCACCTGCT GTACTCGCTC
GGCGCGCTGG CCGACAACCT CATTCATCTC GACCGCCTGC TGCAGGATGC GCGCAACCCC
GACGCCCTCG CCGATGCCCA GGACAACAGC CTGCTCGACC GCGAGCCGCA GTCGCTCGGC
GAGGCCCTGA GCCGCCTGCG CCAGCAGATG ACGCCGGCAT CGCGGCCGTT CCGCCATGCC
CTGCGCCTGG CCGTGGCGCT CCCCGCCGGC TACGGTCTGC TGCACCTGAT CCACCCCACC
CAGGGCTACT GGATACTGCT GACCACCCTG TTCGTCTGCC AGCCCAACTT CGGCGCCACC
CGCCGCCGGG TCCGCCAGCG CATCCTCGGC ACCGTGCTCG GCCTGCTGGC CGGCTGGGCG
CTGTTCGCCC TCTTCCCCAG CCTACAGGTG CAGGCGCTGT TCGCGGTGGT CGCCGGGGTG
GTGTTCTTCG CTACCCGGAC CAGCCACTAC ACCCTGGCCA CCGCGGCGAT CACCCTGCTG
GTGCTGGCCT GCTTCAACCA GGTCGGCGAC AGCTACGGAC TGATCTGGCC GCGCCTGGTC
GACACCCTGC TCGGCAGCCT GATCGCCGGT CTCGCGGTGT TCCTGATCCT CCCCGACTGG
CAGGACCGCC AGTTGAACCG GGTGCTGGCC AACACCCTGG CGTGCAACGC CCGCTACCTG
CGCCAACTGA TGCTGCAGTA CCGCAGCGGC AAGCGCGACG ACCTGGCCTA CCGCCTGGCC
CGGCGCGACG CGCACAACGC CGACGCGGCG CTGTCCACCA CCCTCGCCGG GATGCTCATG
GAGCCCGGCC AGTTCCGCCG CGAGGCGGAC GTCGGCTTTC GCTTCCTGGT CCTTTCCCAC
ACCCTGCTGA GCTACCTCTC CGCGCTCGGC GCGCATCGCG AGCAGTTGCC CGAGGCCGAG
TGCCGCCCGC TGCTCGACGA GGCCGCCGAG CGCCTGGCCA ACAGTCTCGA GGAGATCGCC
CTGGAGCTTG CCGGCAACCG CCCGGTGGCC GAGCACGACG AGACCGAGCA GGTGCTGCTC
CAGCGTCTCG AACAGTTGCC CGAAGAGCAG GACGACGGGC TGCGCCTGGT GCAGAACCAG
TTGGCGCTGA TCGCCGGCCA ACTGGCGCCG CTGCGCAGTC TCGCCGCGCC CCTGCAACGG
AACCCGGTGC ACTGA
|
|---|
| Protein sequence | MPSTPFSQSL RQLWAHHVFS YSLRVFIALT GSMALCWVLD RMDLLIPLFL GIIASALAET
DDSWEGRLQA LLVTLACFAA AAFAVELLFP YPWKFAAALA LSSFGLTMLG ALGERYATIA
SGTLILSIYT MIGIDQRGGP PVDLWREPLV LVAGAAWYGV LSVIWQALFS TQPIQQSLAR
VFRELGEYLK LKASLFEPVR HLDVGQRRLE LAQRNSRVVA ALNAAKEIIL HRVENGRPSP
QVNRYLKLYF LAQDIHERAS SSHYPYNALA EAFFHSDVLF RCRLVIRQQG KSCLALARAI
ELRQPFDCID QSQALEDLHT SLAHLRMQSN PAWRHLLYSL GALADNLIHL DRLLQDARNP
DALADAQDNS LLDREPQSLG EALSRLRQQM TPASRPFRHA LRLAVALPAG YGLLHLIHPT
QGYWILLTTL FVCQPNFGAT RRRVRQRILG TVLGLLAGWA LFALFPSLQV QALFAVVAGV
VFFATRTSHY TLATAAITLL VLACFNQVGD SYGLIWPRLV DTLLGSLIAG LAVFLILPDW
QDRQLNRVLA NTLACNARYL RQLMLQYRSG KRDDLAYRLA RRDAHNADAA LSTTLAGMLM
EPGQFRREAD VGFRFLVLSH TLLSYLSALG AHREQLPEAE CRPLLDEAAE RLANSLEEIA
LELAGNRPVA EHDETEQVLL QRLEQLPEEQ DDGLRLVQNQ LALIAGQLAP LRSLAAPLQR
NPVH
|
|---|
| |