Gene Avin_05570 details

Gene Information

• Locus tag: Avin_05570
• Symbol: tktA-3
• ID: 7759513
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 535100
• End bp: 537097
• Gene Length: 1998 bp
• Protein Length: 665 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 643803477
• Product: transketolase
• Protein accession: YP_002797785
• Protein GI: 226942712
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0021] Transketolase
• TIGRFAM ID: [TIGR00232] transketolase, bacterial and yeast

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCAGCC GTCGTGAGCG AGCCAATGCC ATTCGTGCCC TGAGTATGGA TGCCGTGCAG 
AAAGCCAACA GTGGCCATCC TGGCGCCCCC ATGGGCATGG CGGATATCGC CGAAGTGCTG 
TGGCACGACT ATCTCAGGCA CAACCCGGCC AATCCGCAAT GGGCCGACCG CGACCGCTTC 
GTGCTCTCCA ACGGCCATGG CTCGATGCTG GTCTATTCGC TGCTGCATCT GACCGGCTAC 
GACCTCTCGA TCGACGACCT GAAGAACTTC CGCCAGTTCG GCAGCCGCAC CCCCGGCCAT 
CCCGAATACG GCTATACCCC CGGCGTCGAG ACCACCACCG GCCCGCTCGG CCAGGGCCTG 
GCCAACGCCG TCGGCATGGC CGTGGCGGAG AAGGTGCTGG CCGCGCAGTT CAACCGGCCC 
GGGCAGCGCA TCGTCGATCA TTACACCTAC GTGTTCCTCG GCGACGGCTG CCTGATGGAA 
GGCATCTCCC ACGAAGTCTG CTCGCTGGCC GGCACCCTGG GGCTGAACAA GCTGGTCGCC 
TTCTACGACG ACAACGGCAT CTCCATCGAC GGCGAGGTCG AGGGCTGGTT CACCGACGAC 
ACCCCGGCGC GCTTCGAGGC CTACGGCTGG CTGGTGATCC GCAACGTCGA CGGCCACGAC 
GCCGACGAGA TCCGGACCGC GATCGAGACC GCGCGCAAGA GCGAGCGCCC GGTCCTGATC 
TGCTGCAAGA CGGTGATCGG TTTCGGTTCG CCGAACAAGC AGGGCAAGGA AGCCTGCCAC 
GGCGCCGCGC TGGGGGCCGA GGAAATCGCC CTGACCCGCG ACGCGCTGGG CTGGAAGCAC 
GCGCCGTTCG AGATTCCCGC CGAGATCTAC GCCGGCTGGG ACGCCAGGGC CGCCGGCGCC 
GCCCGCGAGA CCGAATGGAA CCGGCGCTTC GCCGCCTACC AGGCCGAGTT CCCGGAACTG 
GCCGCGGAGT TCCTGCGCCG CAGCCGTGGC GAACTGCCCG CCGATTTCGC CGCGAAGGCC 
GGCGAATACA TCGCCGAAAT CGCCGCCAAG GGGGAAACCA TCGCCAGCCG CAAGGCCAGC 
CAGAACGCGC TGAACGCCTT CGGCCCGCTG CTGCCGGAGT TCCTCGGCGG CTCGGCGGAC 
CTGGCCGGTT CCAACCTGAC CCTGTGGAAG GGCTGCAAGG CGCTCGCGGC GGACGACGCC 
TCCGGTAACT ACCTGCACTA CGGCGTGCGC GAGTTCGGCA TGAGCGCGAT CATGAACGGT 
ATCGCTCTGC ACGGCGGCTT CATTCCCTAC GGCGCCACCT TCCTGGTGTT CATGGAGTAC 
GCCTGCAACG CCGTGCGCAT GGCCGCGCTG ATGAAGCAGC GCGTGCTGTT CGTCTACACC 
CACGACTCCA TCGGCCTCGG CGAGGACGGC CCGACCCACC AGCCGGTCGA GCAACTGGCC 
AGCCTGCGCA GCACGCCGAA CCTCGACACC TGGCGCCCGT GCGACGCGGT GGAGTCGGCG 
GTGGCCTGGA AATGCGCCAT CGAGCGCCAG GACGGCCCGA GCACCCTGGT GTTCAGCCGC 
CAGAACCTGC CGCACCAGGC GCGCGATGCC CGGCAACTGG CCGATATCGC CCGCGGCGGC 
TACGTGCTCC GCGATTGTGC CGGCACCCCG GAGCTGATCC TCATCGCCAC CGGTTCGGAG 
GTCGCCCTGG CGGTGCAGGC CCACGAGACG CTGAGCGGGC AGGGCCGCCG GGTGCGAGTG 
GTTTCCATGC CCTCGACCAG CGTGTTCGAT CGCCAGGACG CCGCCTGGAA ACAGGCCGTG 
CTGCCGTCCG GGGTCGGGGC GCGGATCGCC ATCGAGGCCG CCCACGCCGA CTTCTGGTAC 
AAGTACGTCG GGCTGGCTGG ACGCATCGTC GGCATGACCC GCTTCGGCGA GTCCGCGCCG 
GCCGGCGCGC TCTTCGAGCA TTTCGGCTTC ACCCTCGACA ACCTGCTGGC CAGCGCCGGG 
GAACTGCTCG GGGACTGA 

 

Protein sequence

MPSRRERANA IRALSMDAVQ KANSGHPGAP MGMADIAEVL WHDYLRHNPA NPQWADRDRF 
VLSNGHGSML VYSLLHLTGY DLSIDDLKNF RQFGSRTPGH PEYGYTPGVE TTTGPLGQGL 
ANAVGMAVAE KVLAAQFNRP GQRIVDHYTY VFLGDGCLME GISHEVCSLA GTLGLNKLVA 
FYDDNGISID GEVEGWFTDD TPARFEAYGW LVIRNVDGHD ADEIRTAIET ARKSERPVLI 
CCKTVIGFGS PNKQGKEACH GAALGAEEIA LTRDALGWKH APFEIPAEIY AGWDARAAGA 
ARETEWNRRF AAYQAEFPEL AAEFLRRSRG ELPADFAAKA GEYIAEIAAK GETIASRKAS 
QNALNAFGPL LPEFLGGSAD LAGSNLTLWK GCKALAADDA SGNYLHYGVR EFGMSAIMNG 
IALHGGFIPY GATFLVFMEY ACNAVRMAAL MKQRVLFVYT HDSIGLGEDG PTHQPVEQLA 
SLRSTPNLDT WRPCDAVESA VAWKCAIERQ DGPSTLVFSR QNLPHQARDA RQLADIARGG 
YVLRDCAGTP ELILIATGSE VALAVQAHET LSGQGRRVRV VSMPSTSVFD RQDAAWKQAV 
LPSGVGARIA IEAAHADFWY KYVGLAGRIV GMTRFGESAP AGALFEHFGF TLDNLLASAG 
ELLGD