Gene Avin_05490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_05490 
SymbolnudE 
ID7759505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand+ 
Start bp528948 
End bp529514 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content67% 
IMG OID643803469 
ProductADP-ribose diphosphatase NudE 
Protein accessionYP_002797777 
Protein GI226942704 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.00271926 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCAGA AACCCACCGT ACTCGCTCGA GCGATCGTCG CGACCAGCCG TCTGTTTCGC 
GTCGAGGAAT TGCAGTTGCG CTTCACCAAT GGCGTCGAGC GCACCTATGA GCGTCTGGTG 
GGTACCGGCA GCGGCTACGG CGCGGTGATG GTCGTCGCGC TGATCGACGA CCAGCACGCC 
CTGCTGGTGG AGGAGTACTG CGCCGGCACC GACGATTACC AGTTGTCCTT GCCCAAGGGA 
CTGATCGAGC CGGGCGAGGA CGTGCTGGTG GCGGCTAACC GCGAGCTGAA GGAGGAGGCC 
GGCTACGGCG CCCATCAACT GGAGTACCTC ACCGAGCTGT CCCTTTCGCC CGGCTACATG 
ACCCAGAAGA TCCAGGTGGT GCTGGCCCGC GACCTCTACC CCAAGCGCCT GCCGGGCGAC 
GAGCCGGAGC CGATGCGGGT CGAGCGGGTC AACCTGCGCG AGCTGTCCGG TCTGGTCCGG 
CATGCGCAGT TCAGCGAGGG ACGGGCCCTG GCCGCGCTCT ATCTGGCGCG CGATCTGCTG 
GTTCAGCGCG GAGCGCTGGT CCTGTGA
 
Protein sequence
MRQKPTVLAR AIVATSRLFR VEELQLRFTN GVERTYERLV GTGSGYGAVM VVALIDDQHA 
LLVEEYCAGT DDYQLSLPKG LIEPGEDVLV AANRELKEEA GYGAHQLEYL TELSLSPGYM 
TQKIQVVLAR DLYPKRLPGD EPEPMRVERV NLRELSGLVR HAQFSEGRAL AALYLARDLL 
VQRGALVL