Gene Avin_05240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_05240 
Symbol 
ID7759480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp501565 
End bp502956 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content66% 
IMG OID643803444 
ProductD-galactonate transporter 
Protein accessionYP_002797752 
Protein GI226942679 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR00893] d-galactonate transporter 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGCCA TCAAGCAAAC CCGCGTGCGT TACCTGATTC TGCTCATGCT GTTTCTGGTG 
ACGACGATCA ACTACGCCGA CCGCGCCACC ATCTCCATCG CCGGCTCTTC CCTGCAGAAG
GACCTCGGCA TCGACGCCGT GACCCTCGGC TACATTTTCT CCGCCTTCGG CTGGGCCTAC
GTGCTGGGGC AGATTCCCGG TGGCTGGCTG CTCGACCGCT TCGGCTCCAA GCGCGTCTAT
GCGGTGAGCA TCTTCACCTG GTCGCTGTTC ACCCTGCTGC AGGGCTTCGT CGGCGGCATG
CCGGTGGCCT GGGCGGTGAC CACCATGTTC ATGCTGCGCT TTCTGGTCGG TTTCGCCGAG
GCGCCGTCGT TCCCCGGCAA TGCGCGCATC GTCGCCGCCT GGTTCCCCAC CGCCGAGCGC
GGCACGGCCT CGGCGGTGTT CAACTCCGCG CAGTATTTCG CCACCGCGCT GTTCGCTCCG
TTGATGGGCT GGATCGTCCA CAAGTTCGGC TGGGAGCACG TGTTCGTCAT GATGGGCGCG
CTGGGCATCG TCTTCTCCGG GGTCTGGCTG AAGACCATCT ACAACCCCAA GGAGCACCCG
CGCATCAACC GCGTCGAGCT GGAGCACATC GAGCAGAACG GCGGCCTGGT CGATATGGAC
AGCGCCCGCA AGCCGGGCAG CCAGGGGCCG CGCTGGGACT ACATCCGCCA GTTGCTGACC
AATCGCATGC TGGTCGGCGT CTACCTCGGC CAGTACTGCA TCAACGGCAT CACCTACTTC
TTCCTCACCT GGTTCCCGGT GTACCTGGTG CAGGAGCGCG GCATGTCGAT CCTCAAGGCC
GGCTTCATCG CCTCGCTGCC GGCGCTCTGC GGCTTCATCG GCGGCGTGCT CGGCGGGGTG
ATTTCCGATT GGCTGCTGCG TCGCGGCCAC TCGCTGACCC TGGCGCGCAA GCTGCCCATC
GTCACCGGCC TGCTGCTCTC CACCAGCATG GTGTTCTGCA ACTACATCCA GGCGGAGTGG
ATGGTGGTCG GCTTCATGAC CCTGGCGTTC TTCGGCAAGG GCCTCGGCGC GCTGGGCTGG
GCGGTGGTGG CGGACACCTC GCCGAAGCAG ATCGCCGGCC TCTCGGGCGG GCTGTTCAAC
ACCTTCGGCA ATATCGCCTC GATCACTACG CCGATCGTCA TCGGCTACAT CATCAGCGCC
ACCGGCTCCT TCAAGTGGGC GCTGGTGTAC GTCGGCGCCA ACGCGCTGGT GGCGGTGTTC
AGCTACCTGG TGATCGTCGG CCGCATCCAG CGCGTCGAAC TCAGGGACGG CCCGACCCAG
GGCGGTTCGG CCCACCGGGA GGAGGCCCCG GCCGCTCCAC TCGGTTCCCA GGGCAGCGCG
GCGTCCGCCT GA
 
Protein sequence
MQAIKQTRVR YLILLMLFLV TTINYADRAT ISIAGSSLQK DLGIDAVTLG YIFSAFGWAY 
VLGQIPGGWL LDRFGSKRVY AVSIFTWSLF TLLQGFVGGM PVAWAVTTMF MLRFLVGFAE
APSFPGNARI VAAWFPTAER GTASAVFNSA QYFATALFAP LMGWIVHKFG WEHVFVMMGA
LGIVFSGVWL KTIYNPKEHP RINRVELEHI EQNGGLVDMD SARKPGSQGP RWDYIRQLLT
NRMLVGVYLG QYCINGITYF FLTWFPVYLV QERGMSILKA GFIASLPALC GFIGGVLGGV
ISDWLLRRGH SLTLARKLPI VTGLLLSTSM VFCNYIQAEW MVVGFMTLAF FGKGLGALGW
AVVADTSPKQ IAGLSGGLFN TFGNIASITT PIVIGYIISA TGSFKWALVY VGANALVAVF
SYLVIVGRIQ RVELRDGPTQ GGSAHREEAP AAPLGSQGSA ASA