Gene Avin_05160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_05160 
Symbol 
ID7759472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand+ 
Start bp494979 
End bp495371 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content69% 
IMG OID643803436 
Productheat shock protein implicated in 50S component recycling (S4 paralogue) 
Protein accessionYP_002797744 
Protein GI226942671 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0946751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAAA AAGATGACGA AAAGATCCGT CTGGACAAGT GGCTCTGGGC GGCGCGTTTC 
TACAAGACCC GGGCGTTGGC CAAGGAGGCC ATCGAGGGCG GCAAGGTGCA CTGCCGCGGC 
GAGCGCTGCA AGCCCTCGAA GGAGCCGAGG ATCGGCGACG AACTGACCAT CCGCAGCGGC 
TTCGACGAGC GCACCGTGGT GATCCGCGCG CTCAGCGCGG TGCGCCGTGG CGCGCCCGAG 
GCCCAGCGGC TCTACGAGGA GACCGCCGAG AGCCGGACCA GGCGCGAGGA AGCCGCGGCC 
CTGCGCAAGG CCGGCGCCCT CGGCCTGGAG ACCTCGGGCC GGCCGACCAA GAAACAGCGC 
CGGCAACTGT TCCAGTTCCG CGAGGAGCGC TGA
 
Protein sequence
MNEKDDEKIR LDKWLWAARF YKTRALAKEA IEGGKVHCRG ERCKPSKEPR IGDELTIRSG 
FDERTVVIRA LSAVRRGAPE AQRLYEETAE SRTRREEAAA LRKAGALGLE TSGRPTKKQR 
RQLFQFREER