Gene Avin_05080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_05080 
SymbolbcsC 
ID7759464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp481139 
End bp485242 
Gene Length4104 bp 
Protein Length1367 aa 
Translation table11 
GC content71% 
IMG OID643803428 
Productcellulose synthase subunit C 
Protein accessionYP_002797736 
Protein GI226942663 
COG category[K] Transcription 
COG ID[COG2909] ATP-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGCG CTGCCCTGAA AAAACTCTCC CTGGCCGTGC TCTGCGCCGT CGCAGGGATC 
GCCCATGCCT CGGGCGTTTC GGCCGAGCCG GCGGATGCCG GCATGACGCT CCTGCTCGAA
CAGGCCGACT TCTGGCGCTC CCGCCACCGC CCGGACCTGG CCAGGGAGGC GCTGAACCGC
GCCCTGCAAG TCCGACCGGA CGCCGAGGAA GTCCTCTACC GGCTGGGAAT GCTGTCGCTG
GACGACGAAA AGGCCGCCCG CGCCTGGCTG CAGCGGCTGG CCGACAACCA TCCCGGCAGC
GCGCGTATCG GCGAACTGGA AGCCGCCCTG CGCGGCAGCA AGCTGGACAA GTCCGCGCTG
GCCAGGACCC GGCTCATGGC CGGCCAGGGC GATTCGGCGG GCGCCGTGCA GGCCTATCGC
AAGCTGTTCG GCGACGGAGC GCCGCCGCCC GATCTGGCGC TGGAGTATTA CCAGACCCTG
GCGGGCGTCG ACGGGCACTG GCAGGAAGCC CGCGAGGGGC TGGAAAAGCT CCACGCCGGG
CAGCCGGGCA ACCCGCAGGT GAAGCTCGCC CTGGCCCGCG CGCTGAGCTA CCGGGAAGCG
ACGCGTCGCC AGGCCATCGA GCGACTGGCC GATCTGGCGC CGCAATCGCC GGAGGCCCGC
ACGGCCTGGC GACAGGCCCT GCTCTGGCTG GACGCGGGGA GCGGGGACGA GGCCCTCTAC
AGCCGCTACG AGGCGGCCAA TCCGGGCGAC ACCGAAGTGG CGGCGCGCTT CCAGGCGATG
CTCTCGGCCA AGCGCCAGGA GCCCGGCGAC GGCGCCAGGG CCGCCGGCTT CGACGCGCTG
CAGGGCAAAC GCAACGCGGC GGCCCTGCAG AGCTTCAGGC TGGCGCTGAA CCACAACCCG
CGCGACGCCG AGGCCTGGGG CGGCCTGGGC ATCGCCCAAC TGCGCGCGCA GAACTACCGG
GACGCCGCCA GCAGCCTGCG CAGGGCCACC GAACTGGCCC CCGGCAGCCA GGACCGCTGG
GCGAAGGCGC TGGCCGACGC CGAGTTCTAC GGAAAGCTGC AGACCGCCCG GCAAAAGCGC
GACGACGGCC ACCTGGACAG CGCCGAGGCG CTGGCCCGGC CGCTCGCCGA CGGCAGCGGG
GAACGCCCGC GGGCCGCCAA GCTGCTGCTG GCCGACATCC TGCTGCGCCA GCAGCGCGAC
GCCGAGGCCG AACGGCTCTA TCGCGATCTG CTCGCGGCGG CCGGAAACGA CCGGGCGGCC
CTGGCCGGCC TCTACGACAG CCTGCTGCGC CAGGGCAAGC GGCAGGCCGC CAGCGAACTG
CTGGGCCGCA ATCCCGGCCT GGCCGACGCC CTGCAAGGCG GCCGGCAGCA GGTCGAGGCA
CTGGCCCTGC GCGATCGCGC CGAGGCCCTG CTCAAACAGG GCAGCGGCGA GGAAGCCGCC
CGACTGCTGA ACGAAGCCTT GCGGCTGGCG CCGCAAAACC CCTGGATACG CCTGACCTAC
GCGCGGCTGC TCGATGCCAG GGGCGACCCG CAGCAGGCGC AACGCCTGAT GGAGCCGCCG
GCGAGCGCTC CCGTCGATGC CGAGGCCCTG CACGCCGCCG CGCTGCTGGC CATGGACCAG
GCGCGCTGGG ACGACGCCAG GGCCCATCTG CGCCGCTTGC CGCCGGAACG CCAGGCCAGC
CCGCAGATCC AGGCCCTCGA ACAGCGCCTG CGGATCAGGG AACGCATCGC CTCGGTGCGC
GGTACCGCCA CCGGCGCCAA CCGCCTGGCT GCGCGCCGGG CCCTGCGCGC GTTGCACGAC
GAAACGCCGG AGGAGCCGCT GGTGCGCGGC GAGGTGGCGC TAGCCTTGGC GGAGCTGGGC
GAGCCCGCCC TGGCCCTGGA CATGGTGCGC GACGACCTGC GCAACCTCTC CAGCCACGCG
CCCGCCGACT ACCTCTCGCA CGTCGCCGTA CTGGTCAGGA CCGGCCAGGT GGCCGAGGCC
GAGGTCCTGA TCCACCGCCT GGAACGCGGC GATCTCAACG CCGAGGACCG GGAAGCCCTG
CGCAGGCTGC GCAACGGCTT CGCCGTCGCC CAGGCCGACC GGCAACGGCA GAACGGCGAC
TTGGCGGGCG CCTACGACAC CCTGATGGCC CATATCGACG AATCGCCCGG CGATACCGAA
CTAATGCTGG CCATGGGCCG CCTGTACGAC ACGGGGAAGA TGTACAAGGA AGCCACGGCG
GTCTACGACT CGGTGCTGAA AGATGCGCCG GACAACCTCG AAGGCGTGCG CGGCGCGGTG
AACGCCGCCC TGGGCGGCAA CGACGCCAGG CGCGCCGCGC AGTTGATCGA GCGCGCCGGC
CCGTCGCTCG ACGAAGCCAC GGCGCTGCTG CTGTCCGCCC GCGTGGCCGA AGCGAACGGC
GACCACCGGC GCGCCATCGC CCTGCTCGAA AGCGCCCGGC GCAAGCACCT GGCGGCGACC
GGCCAGGCCG GCGTCGCAGG CGCGACGGCC TTCATGAGGC GCGACAATCC CTTCCGCGAC
CCGCGCGACG CCATGTTCCC CGCCCTGGCG CAGGCCGACG CGGACGCCGG TATCGAAACG
CCGGCGCAGC GCGCGACCGC TCCGCTGGCC GGCCTGCCCG GCTTACGGGC TTTTGCCGGC
CGCGCTCCGT CCACGACGGC CGATCCCCTG GCCAGCGAAA TCGAGGGCCG CCTGAACGCC
CTGCGCGAGA AGACCGCCAC CCGGCTGTCC GCCGCCACCA ACCTGCGTAT CCGCGACGGC
GAGAAAGGCC TGTCCGAGCT GACCGAGGTC AAGGCGCCGC TGCAGCTCTC CATGGTGCCG
CTGGACAACG GCCGCATCGA GCTGAGCGCC ACGCCCACCC GCCTGGACGC CGGCACGCCC
GGCAGCGACG CGGCCAAGCG TTTCGGCAGC TATGCGCTGG CCAGCGGCCT GACCGAGTCC
GTCTTCGGCG CCTACAACGG ACTGGTGCGG AGCTACTCCA GCTCGGCTCT GCAATTGAGA
GAGCAGCAGG CCAGGGAGGC TGGCCAGGTG CTGACCCTGG CGGAACGCGC CGGGATCGTC
GCGGAGGCCA GGAGCCAGGC CGCGCAGGAG ATCGGCAACG CGGCCGTGGC GGCCGGGCTG
AGCGCGGAGC AGGGCGAACG GCTCGCCAGC ACCCTGCTCA ACTCCACCGC CCAGCGCGTG
CTCGCCCCCT ACCGGCCGAA ATCCCAGGAC GACACGGGCG TGGGCCTGAA CCTGGCCTAC
AGCTCCGACT CGCTCAAGGC CGACATAGGC ACGACGCCGC TGGGCTTCGA GAAGACCAAC
CTGGTCGGCG GCGCGAAATG GACGCCGAAG GTCGGCCAGA ACGGCAACCT CGCCCTGGGC
GTCGAGCGGC GCGCGGTGAC CGACAGCCTG CTCGCCTACG CGGGCGCCAA GGACCCGGTC
AGCGGCAAGA CCTGGGGCGG CGTCACCAAG ACCGGGGTCA ACGCCCAGTA CGCCTACGAC
AACGGCGCCG CCGGTTTCTA CGTCGGCGGC GACTATTACC TCTATCGCGG CGACAACGTC
GAGAACAACC ACTCCATCGG CCTGCACACG GGCGCCTATG CGCGCCCCAT CAACACCCCC
AGCCGGGAAC TGCAGACCGG CGTGCACCTG AACTGGATGG GCTTCGACAA GAACCTCAGC
GGCTATACGC TGGGCCACGG CGGCTACTTC AGTCCCGAGA ACTTCGTCGG GCTATCCTTT
CCCGTGCAGT ACAGCCTCAA GAGTGACCGC TGGGACATGA AGCTGCGCGC GGCCGCCGGC
TATCAGTCCT TCACCCAGGA GCGCGCGCCC TATTTCCCCA AGAACAAGGC GCTGCAGAAC
CAGCTCGAAC AACTGGGCAC GGCGGTGCAG AACCTCTCCG ACGGACTGAC CGCCGCCGGC
CAGAGCACGA CGTTGCCGGC CATCGAGACC CATTACCGCG CCGACAGCCA GAGCGGCATG
GCCTTCAACG GCGGCGCCAC GCTCGAATAC CGCCTGAGCG AGCAGACCCG GGTGGGCGGC
ACCATCGGAC ACGACAGCTT CGGCGAATAC TCGGAGACGA CCGGCTCGAT CTATTTCAAA
CACGCCCTGG AGAATCTTCC TTGA
 
Protein sequence
MTRAALKKLS LAVLCAVAGI AHASGVSAEP ADAGMTLLLE QADFWRSRHR PDLAREALNR 
ALQVRPDAEE VLYRLGMLSL DDEKAARAWL QRLADNHPGS ARIGELEAAL RGSKLDKSAL
ARTRLMAGQG DSAGAVQAYR KLFGDGAPPP DLALEYYQTL AGVDGHWQEA REGLEKLHAG
QPGNPQVKLA LARALSYREA TRRQAIERLA DLAPQSPEAR TAWRQALLWL DAGSGDEALY
SRYEAANPGD TEVAARFQAM LSAKRQEPGD GARAAGFDAL QGKRNAAALQ SFRLALNHNP
RDAEAWGGLG IAQLRAQNYR DAASSLRRAT ELAPGSQDRW AKALADAEFY GKLQTARQKR
DDGHLDSAEA LARPLADGSG ERPRAAKLLL ADILLRQQRD AEAERLYRDL LAAAGNDRAA
LAGLYDSLLR QGKRQAASEL LGRNPGLADA LQGGRQQVEA LALRDRAEAL LKQGSGEEAA
RLLNEALRLA PQNPWIRLTY ARLLDARGDP QQAQRLMEPP ASAPVDAEAL HAAALLAMDQ
ARWDDARAHL RRLPPERQAS PQIQALEQRL RIRERIASVR GTATGANRLA ARRALRALHD
ETPEEPLVRG EVALALAELG EPALALDMVR DDLRNLSSHA PADYLSHVAV LVRTGQVAEA
EVLIHRLERG DLNAEDREAL RRLRNGFAVA QADRQRQNGD LAGAYDTLMA HIDESPGDTE
LMLAMGRLYD TGKMYKEATA VYDSVLKDAP DNLEGVRGAV NAALGGNDAR RAAQLIERAG
PSLDEATALL LSARVAEANG DHRRAIALLE SARRKHLAAT GQAGVAGATA FMRRDNPFRD
PRDAMFPALA QADADAGIET PAQRATAPLA GLPGLRAFAG RAPSTTADPL ASEIEGRLNA
LREKTATRLS AATNLRIRDG EKGLSELTEV KAPLQLSMVP LDNGRIELSA TPTRLDAGTP
GSDAAKRFGS YALASGLTES VFGAYNGLVR SYSSSALQLR EQQAREAGQV LTLAERAGIV
AEARSQAAQE IGNAAVAAGL SAEQGERLAS TLLNSTAQRV LAPYRPKSQD DTGVGLNLAY
SSDSLKADIG TTPLGFEKTN LVGGAKWTPK VGQNGNLALG VERRAVTDSL LAYAGAKDPV
SGKTWGGVTK TGVNAQYAYD NGAAGFYVGG DYYLYRGDNV ENNHSIGLHT GAYARPINTP
SRELQTGVHL NWMGFDKNLS GYTLGHGGYF SPENFVGLSF PVQYSLKSDR WDMKLRAAAG
YQSFTQERAP YFPKNKALQN QLEQLGTAVQ NLSDGLTAAG QSTTLPAIET HYRADSQSGM
AFNGGATLEY RLSEQTRVGG TIGHDSFGEY SETTGSIYFK HALENLP