| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_04010 |
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| Symbol | |
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| ID | 7759360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 381597 |
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| End bp | 383111 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643803323 |
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| Product | RND efflux system, outer membrane lipoprotein |
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| Protein accession | YP_002797634 |
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| Protein GI | 226942561 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.174506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCTCGCA ATCTGTGGTC GGGCCTCTGC CTGTCCAGTC TGCTCGCCGT GCTCTCGACC
GTCTCCGGCT GCATCAGCAG CCAAGGCATT CTCCCCAAAG CCCTGCGCCT GAACGACGCC
GAGTTGCTCA CCGACAAGCC CATCGACAAG GCCGTCAGAA AGATGGAATG GCCGCGCGAC
CGCTGGTGGC AAGCCTACGG CGACCCGCAG TTGAACGCCT GGGTCGAGAT GGCCCTGGCC
GACAGCCCGA ACCTGGCCGT GGCCGCCGCG CGGCTGCGCC AGGCCAGGAC GCTGGCCGGA
GTCTCCGAAT CCGAACACGC CCCGCAGGTG AAATACGACG CCATGGTGCA GCGCAAGCAC
TGGCCGGACG ACCAGTACTT CTACGGTCCC GGCATGCTCG CCGACACCAC CGGCTGGAAC
GCCACCTCCT CGTTGGGCCT GAGCTACGAC CTGGACCTCT GGGGCCGCCT GCACAGCCAC
ACCGAACGGG CCCTGAGCCT GGCCGAGGTG GCGGCCACCG AGGAGCGCGC CGCGGCGCTG
GAGCTGCAGA ACAACGTGGT CGCCGCCTAC ATCCAGCTCG CCCTGCACCA CGCCCGGCTG
GAGATCGCCG AAGCCGAACT CAAGCAGCGC GAACAGCTCC TGGCGCTGGC CCGCGAACGC
CTGGCGATCG GCCTCGGCAC CCAACTGGAA ATCAGCGAGG CCGAGGCGCC GCTGCCGGAA
GCGCATCGGC GCATCGACCT GATCCACGAG GCCATCGCCC TGACCCGCAA CCAGTTGGCC
GCCCTGGCCG GCAAGGGCCC CGGCGAAGGC GCGCGGCTCG AACGGCCCAA GCTGTCGCTG
CACGGCGAAC CCAGCCTACC CTCGAACCTG CCGCTGGAAC TGCTCGGCAG GCGCCCGGAC
GTGGTCGCCC GGCGCTGGCA GGTGGCCGCC GAGGCGCGCA GCATCGAAGT GGCCAAGGCG
GATTTCTACC CCAACGTCAA CCTGGTCGCC TTCTTCGGCT CGGGTTCGAC GACCGGCGAG
ATGCTGAACT TCCTGACCAA CGCCAACAAG CTGACCTACG GCATCGGCCC GACCCTGAGC
CTGCCGGTGT TCGACGGCGG CCGCCGGCGC GGCCAGTTGG GCGCGGCCAC CGCCGCCTAC
GACATGGCCG TCGAGCAGTA CAACCAGACC CTGGTGGACG CGCTCAAGAG CGTGTCCGAC
CACCTGATCC GCCTGCACTC GCTGCACGAG CAGGAAATCT TCGTCGGCCA CGGCCTGGAA
ACCGCCGAGC GGCGCTACCG GCTGGCCGAG GAAGCCTACC GCCGCGGCCT GACCGACTAC
CGCTCGGTGC TCGAAGCGCA GAGCGAACTC TTCGAGCAGC AATTCCTCGA ACAGCGGGTG
CACGCCGAAC ACCTGACCGC CCAGGCCGGA CTCTGGGTAG CGCTCGGTGG CGGCGTACTC
ACGGACGACA GCGGCCCCGC CGCCCGGCAA CTGGACGCGC ACGAAATCTC CCTGCACCTC
CCCGGCCGCC ACTGA
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| Protein sequence | MPRNLWSGLC LSSLLAVLST VSGCISSQGI LPKALRLNDA ELLTDKPIDK AVRKMEWPRD
RWWQAYGDPQ LNAWVEMALA DSPNLAVAAA RLRQARTLAG VSESEHAPQV KYDAMVQRKH
WPDDQYFYGP GMLADTTGWN ATSSLGLSYD LDLWGRLHSH TERALSLAEV AATEERAAAL
ELQNNVVAAY IQLALHHARL EIAEAELKQR EQLLALARER LAIGLGTQLE ISEAEAPLPE
AHRRIDLIHE AIALTRNQLA ALAGKGPGEG ARLERPKLSL HGEPSLPSNL PLELLGRRPD
VVARRWQVAA EARSIEVAKA DFYPNVNLVA FFGSGSTTGE MLNFLTNANK LTYGIGPTLS
LPVFDGGRRR GQLGAATAAY DMAVEQYNQT LVDALKSVSD HLIRLHSLHE QEIFVGHGLE
TAERRYRLAE EAYRRGLTDY RSVLEAQSEL FEQQFLEQRV HAEHLTAQAG LWVALGGGVL
TDDSGPAARQ LDAHEISLHL PGRH
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