Gene Avin_03630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_03630 
SymboldctM 
ID7759323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp344015 
End bp345298 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content67% 
IMG OID643803287 
ProductTRAP dicarboxylate transporter, large integral membrane subunit; DctM 
Protein accessionYP_002797598 
Protein GI226942525 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1593] TRAP-type C4-dicarboxylate transport system, large permease component 
TIGRFAM ID[TIGR00786] TRAP transporter, DctM subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00244507 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATCC TGTTCCTCTT CCTCGCCCTG TTCCTGCTGA TGTTCATCGG CGTGCCGATC 
GCCATCGCCC TGGGCCTGTC CGGCTCGCTG ACCATCATGC TGTTCAGCCC CGACTCGGTG
CGCTCGCTGG CGATCAAGCT GTTCGAGACC TCCGAGCACT ACACCCTGCT GGCGATCCCC
TTCTTCCTGC TGGCCGGCGC CTTCATGACC ACCGGCGGCG TGGCGCGCCG GCTGATCGAC
TTCGCCAACG CCTGCGTCGG GCACATCCGC GGCGGCCTGG CGATCGGCGC GGTGCTCGCC
TGCATGCTGT TCGCCGCGCT GTCCGGCTCC AGTCCGGCCA CGGTGGCGGC GGTCGGCTCC
ATCGCCATCG CCGGCATGGT GCGCTCGGGC TACCCGCAGG CCTTCGGCGC CGGCATCGTC
TGCAACGCCG GGACCCTCGG CATCCTGATC CCGCCGTCGG TGGTGATGGT GGTCTACGCC
GCCGCCACGG AAAGCTCGGT CGGCAAGCTG TTCATGGCCG GAGTGCTGCC GGGCATCCTG
CTCGGCGTGG TGCTGATGGT GGCGATCTAT ATCGTCGCGG CGAAGAAACA CCTGCCGGCC
CTGCCGCGGG CGACCCCGAG CGAATGGCTT TCCGCCGCGC GCAAGGCGAT CTGGGGCCTG
CTCCTGATGG CGATCATCCT CGGCGGCATC TACTCGGGCA TGTTCACCCC CACCGAGGCG
GCGGCGGTGG CGGCGGTCTA CGCGGCCTTC GTCGCGCTGT TCGTCTACAA GGACATGCGC
TTGCGCGAGG TGCCCAGGGT GCTATTGGAG TCGGGCAAGC TGTCGATCAT GCTGATGTTC
ATCATCGCCA ACGCGATGCT CTTCGCCCAT GTGCTGACCA CCGAGCAGAT CCCGCAGACC
ATCACCGCCT GGGTGATCGG GATGGGCCTG TCGCCGTGGA TGTTCCTGCT GGTGGTGAAC
CTGGTGTTGC TGGTCGCCGG TGCCTTCATG GAGCCCTCGG CGATCATCCT GATCCTCGCG
CCGATCCTCT TCCCCATCGC CATGCGCCTG GGCATCGACC CGATCCACCT GGGTATCGTC
ATGGTGGTGA ACATGGAGAT CGGCCTGATC ACCCCGCCGG TGGGGCTGAA CCTGTTCGTC
GCCTCGGCGG TGACCGGCAT GAGCGTCGGC CAGGTGATCC ATGCCGCGCT GCCCTGGCTG
CTGATACTGC TGGGCTTTCT GCTGGTCATC ACCTACGTGC CGGCCATTTC CCTGGCCCTG
CCGAACTGGC TGGGGATGGG CTGA
 
Protein sequence
MTILFLFLAL FLLMFIGVPI AIALGLSGSL TIMLFSPDSV RSLAIKLFET SEHYTLLAIP 
FFLLAGAFMT TGGVARRLID FANACVGHIR GGLAIGAVLA CMLFAALSGS SPATVAAVGS
IAIAGMVRSG YPQAFGAGIV CNAGTLGILI PPSVVMVVYA AATESSVGKL FMAGVLPGIL
LGVVLMVAIY IVAAKKHLPA LPRATPSEWL SAARKAIWGL LLMAIILGGI YSGMFTPTEA
AAVAAVYAAF VALFVYKDMR LREVPRVLLE SGKLSIMLMF IIANAMLFAH VLTTEQIPQT
ITAWVIGMGL SPWMFLLVVN LVLLVAGAFM EPSAIILILA PILFPIAMRL GIDPIHLGIV
MVVNMEIGLI TPPVGLNLFV ASAVTGMSVG QVIHAALPWL LILLGFLLVI TYVPAISLAL
PNWLGMG