Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_03630 |
Symbol | dctM |
ID | 7759323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 344015 |
End bp | 345298 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643803287 |
Product | TRAP dicarboxylate transporter, large integral membrane subunit; DctM |
Protein accession | YP_002797598 |
Protein GI | 226942525 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00244507 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATCC TGTTCCTCTT CCTCGCCCTG TTCCTGCTGA TGTTCATCGG CGTGCCGATC GCCATCGCCC TGGGCCTGTC CGGCTCGCTG ACCATCATGC TGTTCAGCCC CGACTCGGTG CGCTCGCTGG CGATCAAGCT GTTCGAGACC TCCGAGCACT ACACCCTGCT GGCGATCCCC TTCTTCCTGC TGGCCGGCGC CTTCATGACC ACCGGCGGCG TGGCGCGCCG GCTGATCGAC TTCGCCAACG CCTGCGTCGG GCACATCCGC GGCGGCCTGG CGATCGGCGC GGTGCTCGCC TGCATGCTGT TCGCCGCGCT GTCCGGCTCC AGTCCGGCCA CGGTGGCGGC GGTCGGCTCC ATCGCCATCG CCGGCATGGT GCGCTCGGGC TACCCGCAGG CCTTCGGCGC CGGCATCGTC TGCAACGCCG GGACCCTCGG CATCCTGATC CCGCCGTCGG TGGTGATGGT GGTCTACGCC GCCGCCACGG AAAGCTCGGT CGGCAAGCTG TTCATGGCCG GAGTGCTGCC GGGCATCCTG CTCGGCGTGG TGCTGATGGT GGCGATCTAT ATCGTCGCGG CGAAGAAACA CCTGCCGGCC CTGCCGCGGG CGACCCCGAG CGAATGGCTT TCCGCCGCGC GCAAGGCGAT CTGGGGCCTG CTCCTGATGG CGATCATCCT CGGCGGCATC TACTCGGGCA TGTTCACCCC CACCGAGGCG GCGGCGGTGG CGGCGGTCTA CGCGGCCTTC GTCGCGCTGT TCGTCTACAA GGACATGCGC TTGCGCGAGG TGCCCAGGGT GCTATTGGAG TCGGGCAAGC TGTCGATCAT GCTGATGTTC ATCATCGCCA ACGCGATGCT CTTCGCCCAT GTGCTGACCA CCGAGCAGAT CCCGCAGACC ATCACCGCCT GGGTGATCGG GATGGGCCTG TCGCCGTGGA TGTTCCTGCT GGTGGTGAAC CTGGTGTTGC TGGTCGCCGG TGCCTTCATG GAGCCCTCGG CGATCATCCT GATCCTCGCG CCGATCCTCT TCCCCATCGC CATGCGCCTG GGCATCGACC CGATCCACCT GGGTATCGTC ATGGTGGTGA ACATGGAGAT CGGCCTGATC ACCCCGCCGG TGGGGCTGAA CCTGTTCGTC GCCTCGGCGG TGACCGGCAT GAGCGTCGGC CAGGTGATCC ATGCCGCGCT GCCCTGGCTG CTGATACTGC TGGGCTTTCT GCTGGTCATC ACCTACGTGC CGGCCATTTC CCTGGCCCTG CCGAACTGGC TGGGGATGGG CTGA
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Protein sequence | MTILFLFLAL FLLMFIGVPI AIALGLSGSL TIMLFSPDSV RSLAIKLFET SEHYTLLAIP FFLLAGAFMT TGGVARRLID FANACVGHIR GGLAIGAVLA CMLFAALSGS SPATVAAVGS IAIAGMVRSG YPQAFGAGIV CNAGTLGILI PPSVVMVVYA AATESSVGKL FMAGVLPGIL LGVVLMVAIY IVAAKKHLPA LPRATPSEWL SAARKAIWGL LLMAIILGGI YSGMFTPTEA AAVAAVYAAF VALFVYKDMR LREVPRVLLE SGKLSIMLMF IIANAMLFAH VLTTEQIPQT ITAWVIGMGL SPWMFLLVVN LVLLVAGAFM EPSAIILILA PILFPIAMRL GIDPIHLGIV MVVNMEIGLI TPPVGLNLFV ASAVTGMSVG QVIHAALPWL LILLGFLLVI TYVPAISLAL PNWLGMG
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