Gene Avin_03590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_03590 
SymbolligB 
ID7759319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp337991 
End bp339673 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content75% 
IMG OID643803283 
ProductNAD-dependent DNA ligase LigB 
Protein accessionYP_002797594 
Protein GI226942521 
COG category[L] Replication, recombination and repair 
COG ID[COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.145228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACGCC GGATCGCGTT TTCCCTCCTG CTTCTACTGC CCTTCGCCTC GCCCGCTCTC 
GCCGACTCCG CCTGTCCGGA CTGGACAGCG CAACGCGCCG CCGCCGAACT GGCGGCGCTC
GCCGAGCGCC TGCGCCAATG GGATGTGGCC TACCACCGCG ACGGCCGCTC GCCGGTGGCC
GACGAACTCT ACGACCAGGC CCGCGCCCGC CTGGCCGACT GGAACCGCTG CTTTCCCGGC
CAGGCCGACG CATCTCCCGA GCCCCTCGCC GGCAGTGCCG GCCCCCTGCT CCATCCGGTA
CCGCACACCG GTCTTGCCAA ACTCGACGAG GCCGCGGTGC GGGACTGGAT GGCCACGCGC
GAGGACCTCT GGACCCAGCC CAAGGTGGAC GGCGTGGCGG TCACCCTGGA ATACGCCGAC
GGGCGCCTGC GACGCGCCAT CAGCCGCGGC GACGGCCGGC ATGGCCAGGA CTGGACGGCC
CGGGTCCGGC GCCTGCCAGC GCTGCCGCGG CAACTGGCGG AAAGGCGACG CCTGATCCTG
CAGGGCGAAC TCTACTGGCG GCTTCCCGGC CATGTGCAGG CCGAAGCCGG CGGACGGAGC
GCGCGGGCCA GGGTCGCCGG CCTGCTGGCG CGCGACACCC TGGACGACGG GGACGCCGCC
GGCATCGGCC TGTTCGTCTG GGACTGGCCG AACGGCCCGG CGGACATGCG CGCGCGACTG
GACGGCCTGG AGCGGCTCGG CTTCGCCGAG GCGCGCCGCT ACAGCCGGCC GGTGGCGGAC
TTCGCCACCG CGCGGCAATG GCGCGAGCGC TGGTATCGCG AGCCGCTGCC CTTCGCCAGC
GACGGCGTGG TGCTGCGCCA GGGCCGCCGC CCGCCGGGCG AGCGCTGGCG GGCGGAGCCG
CCGCACTGGG CGGTGGCCTG GAAGTATCCC CTCGCCCAGG CGCTGGCCGA GGTGCGCGCG
GTGCGTTTTC GCATCGGCCG CAGCGGGCGC ATCACACCGC AACTGGAATT GCAGCCGGTA
CGCCTGGACG ACCGGCAGAT CCGCCGGGTA GCCCTCGGCT CGCTGCGCCG CTGGCGGGAG
CTGGACGTCC GTCCCGGCGA CCAGGTGGCG ATCCGCCTGG CCGGACAGAG CATTCCGCAG
GTGGACGCCG TGGTCTGGCG CGCCGCCGAA CGCCCGGCGC TGCCCTCACC CGATCCGGCC
GCCCACCACG CGCTGAGCTG CTGGCGGCCG CTGCCGGGCT GCGAGGAACA GTTCCTCGCC
CGTCTCGACT GGCTCGGCGG CCGGCGCGGC CTGGACCTCC GCGGAGTCGG CCGCGGCACT
TGGGAGGCAC TGCTGGAGAA CGGTCGGCTC GACGACCTGC TCGGCTGGCT GGAGCTGGAC
GAAGCGCGCC TGGCCGAGCT GCCCGGCTTC GGCGAGCGCA GCGCCAGCCT GCTGGCCGAG
CGTTTCCGCG CGGCGCGCCG GCGTCCCTTC CCGATGTGGC TGCGGGCTCT CGGCCTGCCG
CCGGCCGGCG AGGCGACGCT GCCGCCCTCC TGGGACGAAC TGGCCGGGCG CGGCCCGGAG
CAATGGCAGC GCGAGCCCGG CATCGGCCCC GGCCGTGCCC GCCAGTTGCA GGCCTTCTTC
GCGCATCCGG AGGTGCAGGC GCTGCGCCAG CGCCTGCGGG CGGCGGGAGT CGAGGGCTTC
TGA
 
Protein sequence
MQRRIAFSLL LLLPFASPAL ADSACPDWTA QRAAAELAAL AERLRQWDVA YHRDGRSPVA 
DELYDQARAR LADWNRCFPG QADASPEPLA GSAGPLLHPV PHTGLAKLDE AAVRDWMATR
EDLWTQPKVD GVAVTLEYAD GRLRRAISRG DGRHGQDWTA RVRRLPALPR QLAERRRLIL
QGELYWRLPG HVQAEAGGRS ARARVAGLLA RDTLDDGDAA GIGLFVWDWP NGPADMRARL
DGLERLGFAE ARRYSRPVAD FATARQWRER WYREPLPFAS DGVVLRQGRR PPGERWRAEP
PHWAVAWKYP LAQALAEVRA VRFRIGRSGR ITPQLELQPV RLDDRQIRRV ALGSLRRWRE
LDVRPGDQVA IRLAGQSIPQ VDAVVWRAAE RPALPSPDPA AHHALSCWRP LPGCEEQFLA
RLDWLGGRRG LDLRGVGRGT WEALLENGRL DDLLGWLELD EARLAELPGF GERSASLLAE
RFRAARRRPF PMWLRALGLP PAGEATLPPS WDELAGRGPE QWQREPGIGP GRARQLQAFF
AHPEVQALRQ RLRAAGVEGF