Gene Avin_03320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_03320 
SymbolhipA 
ID7759292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp310311 
End bp311534 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content63% 
IMG OID643803256 
Producthypothetical protein 
Protein accessionYP_002797567 
Protein GI226942494 
COG category[R] General function prediction only 
COG ID[COG3550] Uncharacterized protein related to capsule biosynthesis enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.79257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCACCG CCTACATCTA CATGCAATTG CCCGACTCGC TCGAGGTGAC GACGATCGGG 
CGTTTGCAGG TACGGAGCGG CGTGGGCGAA TTCGTCTACA GCCCCGCATA TGTGAAGACG
GGCGGCTGGG TACCGGACCC CGTGCGTTAC TCACTGCGAC CGGAGCCGTT CTCTCATATC
ACCAAGAACC GTGGCGTGCC GGGCTTCATC AGGGATGCCG CTCCGGATGG ATGGGGCGAG
CGCCTGGCCA ACCGTGAAAG CGACACCCCC CTGGACGCCA TCGGTTTTCT GCTGAAGTCG
CCCAACCACG ACCGCACCGG TAACCTCATG GCCGGGACGA GCAGAACACC TCCGGCCGGT
ATCGGCCAGG CCGGGCTGGG CAATATCGCC CAGCTCGATG AGTTCATAGC GTTCGCCGAC
GGCATCCAGA ACGGATTTCC CAGGAGCGCG GACAAGGCGA CGAAGGCAGC TCTGCAGCAA
CGCTCATCCC TCGGCGGGGC TCGCCCCAAG TGCACGCTAC TCCATGGGGA ACGACTGATC
CTGGCCAAGC CGCGGGATCG TCACGATACC TGCGATATCC CGTCCCTCGA GTATGCCTGC
ATGTCTTTCG CGGCCGCCAA GGGCCTGGCT ACCCCTGGCG TCGAGCTTCA CCGGGGCAGG
GTGAGCACGC TCCTGGTCGA TCGATTCGAC CGGGAGCCGG GTGGCGATGG CCGTTTCTAC
CGGATTCCGA TGCTCAGCGG CCTGACCCTG CTCGATAGCG ATTGGATGTC GACCACGAAC
AGAGACAAGG AGTGGCACTA CGGTTACCTG GTGGATGAAA TGGCGCGCCG CGGCGTTCCC
GTAGAGGATC GCCAGGAGCT GTTCAAGCGG ATCTGCTTCA ACATCCTGGT CGGCAACGAC
GACGATCACC CGAAGAACGT CGCCGTGCTG TTCAAGGACG GCCGTTGGCG CCTGTCTCCG
CTGTACGACG TGGTTCCGAC CACGGAGGGG GCGGCACCGA CTCGTCTGGC CATGGCAATC
GGCAAGCATG GCCATGAACT TTCGCGTCGC AACCTGCTGA GCCAGACGGA GCACTATGGG
CTGGCTCAAG AGCAGGCAAT CGCAGTCATC GATGAAGTGG CCGGTTGGGC AGCCGACCTG
GCCGCCCACT ATCGTCGGCA CCTGCAAGAT CCCGAGCTGC AACTGGCGTT GGCCGCCATG
GGAGCCGACA AGCTCGATGC TTGA
 
Protein sequence
MATAYIYMQL PDSLEVTTIG RLQVRSGVGE FVYSPAYVKT GGWVPDPVRY SLRPEPFSHI 
TKNRGVPGFI RDAAPDGWGE RLANRESDTP LDAIGFLLKS PNHDRTGNLM AGTSRTPPAG
IGQAGLGNIA QLDEFIAFAD GIQNGFPRSA DKATKAALQQ RSSLGGARPK CTLLHGERLI
LAKPRDRHDT CDIPSLEYAC MSFAAAKGLA TPGVELHRGR VSTLLVDRFD REPGGDGRFY
RIPMLSGLTL LDSDWMSTTN RDKEWHYGYL VDEMARRGVP VEDRQELFKR ICFNILVGND
DDHPKNVAVL FKDGRWRLSP LYDVVPTTEG AAPTRLAMAI GKHGHELSRR NLLSQTEHYG
LAQEQAIAVI DEVAGWAADL AAHYRRHLQD PELQLALAAM GADKLDA