Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_03190 |
Symbol | |
ID | 7759279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 297112 |
End bp | 297831 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643803243 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_002797554 |
Protein GI | 226942481 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCTGT CCCGCTTCTT CATCGACGCC CCCCTCGCCC TCGGCCTCCT CGATCTGCCG GAAGCCCAGG CCCACTATAT CGGCCGCGTG CTCAGGCTCG CCCCGGGCGA TGCCGTGCAA CTGTTCGACG GCAGCGGCCG GGAGTTCCGC GGCGAACTGG TCGAGGTGGG CAAGAAGAGC GTGCGGGTGG AGCTGCGCGA ACAGCTTCCC GGCCTGGCCG AATCGCCGCT GCGCATCCAT CTGGGCCAGG GCCTGTCGCG CGGCGAGCGG ATGGACTGGG CGATCCAGAA GGCCACCGAA CTGGGCGTGG CGGAAATCAC CCCGCTGCTC AGCGAGCGCT GCGAGGTACG CCTGAAGGAC GAGCGCGCCG ACAAGCGCCT GGCCCACTGG CAGCAGATCG CCATCAGCGC CTGCGAGCAG TGCGGCCGCT CGGTGCTGCC GACGATCCAC CCTCCGGCAC CGCTGGAAGA CTGGCTGAAG GGTATCGAGG CCGAACTGAA GCTGGTCCTG CACCCGTTCG CCGAGCCCCT GGCCAGCCAT GCCCGGCCGG CCTCGCTGGC CTTCCTGATC GGCCCCGAGG GCGGCCTGTC CGAGACGGAG GTGGACGCGG CGCGGCGAGC CGGCTATCGG GCCGCCCGCC TCGGTCCGCG GGTACTGCGC ACCGAGACGG CGCCGGTGGT GGCGCTGAGC GTGGCCCAGC AGTTGTGGGG GGATTTCTGA
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Protein sequence | MRLSRFFIDA PLALGLLDLP EAQAHYIGRV LRLAPGDAVQ LFDGSGREFR GELVEVGKKS VRVELREQLP GLAESPLRIH LGQGLSRGER MDWAIQKATE LGVAEITPLL SERCEVRLKD ERADKRLAHW QQIAISACEQ CGRSVLPTIH PPAPLEDWLK GIEAELKLVL HPFAEPLASH ARPASLAFLI GPEGGLSETE VDAARRAGYR AARLGPRVLR TETAPVVALS VAQQLWGDF
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