| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_03090 |
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| Symbol | pilT |
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| ID | 7759269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 287888 |
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| End bp | 288922 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643803233 |
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| Product | Pilus retraction protein |
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| Protein accession | YP_002797544 |
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| Protein GI | 226942471 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.166876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATCA CCGAACTGCT CGCCTTCGGC GCCAGGCAGG GCGCGTCGGA CCTGCACCTT
TCCGCCGGCC TGCCGCCGAT GATCCGCGTC GACGGCGACG TGCGCCGCAT CGACCTGCCG
CCGCTGGACC ACAAGCAGGT GCACGCACTG ATCCACGACA TCATGAACGA CAAGCAGCGC
AAGGATTACG AAACGTTTCT CGAAACCGAC TTCTCCTTCG AGGTGCCGAG CGTGGCGCGC
TTCCGGGTCA ACGCCTTCAA CCAGAACCGT GGCGCCGGCG CGGTGTTCCG CACCATTCCG
TCGCGCGTCC CGAGCATGGA CGAGCTGGAG ATGGGCGAGG TGTTCAGGAA GATCGCCGAG
GTGCCGCGCG GCCTGGTGCT GGTCACCGGC GCCACTGGCT CGGGCAAGTC GACCACCCTG
GCGGCCATGC TCGACTACCT GAATGGCAGC AGGCACCAGC ACATCCTCAC CATCGAGGAC
CCGATCGAAT TCGTCCACGA GCCGAAGAAG TGCCTGATCA ACCAGCGCGA AGTGCACCGC
GACACCCTGG GCTTCGCCGA GGCGCTGCGT TCGGCGCTGC GCGAGGACCC GGACGTCATC
CTGGTCGGCG AGATGCGCGA CCTGGAAACC ATCCGCCTGG CGCTGACCGC CGCGGAAACC
GGCCACCTGG TGTTCGGCAC CCTGCACACC ACCTCGGCGG CCAAGACCAT CGACCGGGTG
GTCGACGTGT TTCCCGCGGA GGAGAAGGCG ATGGTCCGCT CGATGCTCTC CGAATCGCTG
CAGGCGGTGA TCTCCCAGAC CCTGCTGAAG AGGGTCGGCG GCGGCCGGGT GGCGGCCCGC
GAGATCATGA TCGGCACCCC GGCGATCCGC AATCTGATCC GCGAGGACAA GGTGGCGCAG
ATGTACTCGG CGATCCAGAC CGGCGGCTCG CTGGGCATGC AGACCCTGGA CATGGCGTTG
AAGAGCCTGC TGTCCAGGGG CGCGATCAGC CGCGAGAGCG CCCGCGAGAA GGCGAAGATT
CCCGACAGTT TCTAG
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| Protein sequence | MDITELLAFG ARQGASDLHL SAGLPPMIRV DGDVRRIDLP PLDHKQVHAL IHDIMNDKQR
KDYETFLETD FSFEVPSVAR FRVNAFNQNR GAGAVFRTIP SRVPSMDELE MGEVFRKIAE
VPRGLVLVTG ATGSGKSTTL AAMLDYLNGS RHQHILTIED PIEFVHEPKK CLINQREVHR
DTLGFAEALR SALREDPDVI LVGEMRDLET IRLALTAAET GHLVFGTLHT TSAAKTIDRV
VDVFPAEEKA MVRSMLSESL QAVISQTLLK RVGGGRVAAR EIMIGTPAIR NLIREDKVAQ
MYSAIQTGGS LGMQTLDMAL KSLLSRGAIS RESAREKAKI PDSF
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