Gene Avin_02940 details

Gene Information

• Locus tag: Avin_02940
• Symbol: radC
• ID: 7759254
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 277220
• End bp: 277894
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 643803218
• Product: DNA repair protein RadC
• Protein accession: YP_002797529
• Protein GI: 226942456
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2003] DNA repair proteins
• TIGRFAM ID: [TIGR00608] DNA repair protein radc

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCATTC GGGACTGGCC GGCGGCGGAG CGGCCGCGGG AAAAACTGCT GGAGCAGGGG 
GCGTCGGCGC TGAGCGATGC CGAGCTTTTG GCGATCTTCC TGCGCACCGG GGTCGCCGGG 
CAGACCGCGG TGGATCTGGC CCGCCACCTG CTGAACGATT TCGGCGGCCT GCGTGCCCTG 
CTCGAGGCCG ATCGGGCCGC GTTCAGCCGC CGCCTCGGCC TCGGTCCGGC CAAGTTCGCC 
CAGTTGCAGG CGGTGCTGGA AATGTCCCGC CGGCACCTGG CCGAGCGCCT GCGCCGCGAT 
CCGGCGCTGG AGAGCCCGCA GGCGGTGCGC GATTACCTGA AGGCGCGCCT GCGCCACGAG 
CCCCACGAGG TCTTCGGCTG CCTGTTCCTC GACGCCAAGC ATCGGGTGCT GGCTTTCGAG 
GTGCTGTTCC AGGGCACCGT CGACGGCGCC AGCGTCTATC CGCGCCAAGT GCTCAAGCGC 
GCCCTGGCGC ACAACGCCGC CGCGCTGATC CTCACCCACA ACCATCCTTC CGGCATCGCC 
GAGCCGAGCC AGGCGGACTT CAGCCTGACC CGGCGGCTGA AGGAGGCGCT GGCGCTGGTC 
GATGTGCGGG TACTCGATCA TTTCATCGTC GGCGACGGCG AGCCGCTGTC GATGGCCGAG 
CAGGGCTGGC TGTAG 

 

Protein sequence

MGIRDWPAAE RPREKLLEQG ASALSDAELL AIFLRTGVAG QTAVDLARHL LNDFGGLRAL 
LEADRAAFSR RLGLGPAKFA QLQAVLEMSR RHLAERLRRD PALESPQAVR DYLKARLRHE 
PHEVFGCLFL DAKHRVLAFE VLFQGTVDGA SVYPRQVLKR ALAHNAAALI LTHNHPSGIA 
EPSQADFSLT RRLKEALALV DVRVLDHFIV GDGEPLSMAE QGWL