Gene Avin_02880 details

Gene Information

• Locus tag: Avin_02880
• Symbol: pyrE
• ID: 7759248
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 271539
• End bp: 272180
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 643803212
• Product: orotate phosphoribosyltransferase
• Protein accession: YP_002797523
• Protein GI: 226942450
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0461] Orotate phosphoribosyltransferase
• TIGRFAM ID: [TIGR00336] orotate phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGGCCT ACCAGCGCGA ATTCATTCGT TTCGCCATCG AGCGCGGTGT GCTGCGCTTC 
GGCGAGTTCA CCCTCAAGTC GGGACGGACC AGCCCTTATT TCTTCAACGC CGGCTTGTTC 
GACAGCGGGC TGGCGTTGGC GCGACTGGGC CGTTTCTACG CCTCGGCCCT GGTCGGTAGC 
GGCATTGCCT TCGACGTGCT GTTCGGGCCG GCCTACAAGG GCATCCCGCT GGCCGCGGCG 
ACCGCGGTGG CGCTGGCCGA GCACCATGGA CTCGACCTGC CCTGGTGCTT CAACCGCAAG 
GAAGCCAAGG ACCACGGCGA GGGCGGCAGC CTGGTCGGCG CACCGCTGAG CGGGCGGGTA 
CTGATCGTCG ACGACGTGAT CACCGCCGGC ACGGCGATCC GCGAGGTGAT GCAGATCATC 
CAGGGGCAGG GCGCCCGGGC GGCCGGCGTG CTGATCGCGC TGAACCGCCA GGAACGCGGC 
CAGGGCGCGC TGTCGGCGAT CCAGGAGGTC GAGCGCGACT TCGCCATGCC GGTGGTCAGC 
ATCGCTTCCC TCTCCGATGT GCTGGAGTAC CTGGCGGAAG ATGCGCAGCT CAAGCGCCAT 
TTGAGCGCCG TGGAAGCCTA TCGTGCGCAA TACGGCATAT GA 

 

Protein sequence

MQAYQREFIR FAIERGVLRF GEFTLKSGRT SPYFFNAGLF DSGLALARLG RFYASALVGS 
GIAFDVLFGP AYKGIPLAAA TAVALAEHHG LDLPWCFNRK EAKDHGEGGS LVGAPLSGRV 
LIVDDVITAG TAIREVMQII QGQGARAAGV LIALNRQERG QGALSAIQEV ERDFAMPVVS 
IASLSDVLEY LAEDAQLKRH LSAVEAYRAQ YGI