Gene Avin_02690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_02690 
SymbolpcaK 
ID7759230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp253818 
End bp255194 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content70% 
IMG OID643803194 
Product4-hydroxybenzoate transporter PcaK 
Protein accessionYP_002797505 
Protein GI226942432 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR00895] benzoate transport 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACTC CCCTTGCGCT TCCCGGCGAG GCCGCCGCAT CCGGCCGCGC CCCGGTTCCG 
AAAACCCTCG ACGTACAGGC CTTCATCGAT TCCCGGCCGC TCGGCCTCTA CCAGTGGCGC
ATCGTTCTGC TGTGTTTCCT GATCGTCTTC CTCGACGGTC TGGATACCGC CGCCATGGGC
TTCATCGCCC CGGCGCTGGT CCAGGACTGG GGCATCGACC GCGCCAGCCT CGGCCCGGTG
ATGAGCGCCG CGCTGATCGG CATGGTGTTC GGCGCGCTCT GCTCCGGTCC GCTGGCCGAC
CGCTTCGGTC GCAAGGGCGT GCTGGTCGGT TCGGCGCTGC TGTTCGGCCT GTTCAGCCTG
GCGTCGGCCT ACAGCGATAA CGTCGGCGAA CTGGTGGTGC TGCGCTTTCT CACCGGTCTG
GGACTCGGCG CGGCCATGCC CAACGCCACC ACGCTGCTGT CGGAATACAC CCCGGTGCGC
CACAAGTCGC TGCTGGTGAC CAGCATGTTC TGCGGCTTCA ACCTGGGCAT GGCGGCCGGC
GGCTTCGTCT CCGCCTGGAT GATCCCGGCC TATGGCTGGC ACAGCCTGCT GCTGGTCGGT
GGCGTGCTGC CGCTGCTCCT GGCGCTGGTG CTGCTGTTCT GGCTGCCCGA GTCGGCCCGC
TACCTGGTGG CGCGCGGTCA CGACGTCGGG CGTGTCCGCC GGGTGCTGCG GCCGATCGGC
GAGGAAGCGG CGCAGGCCAG GGGCTTCAGC ATCCCCGAAC AGCGCACGGA GAAGGCCGGC
GGCGTCTTCG CGGTGATCTT CGGCGGCACC TTCCGTGTCG GCACCCTGCT GCTCTGGCTC
ACCTATTTCA TGGGCCTGGT GATCGTCTAT CTGCTGACCA GCTGGCTGCC CACGCTGCTG
CGCGACAGCG GCGCGAGCAT GGAGCGGGCC GCCTTCGTCG GCGCGCTGTT CCAGTTCGGC
GGCGTGCTCA GCGCGGTGGC GGTGGGCTGG GCCATGGACC GCATGAACCC GCACAAGGTG
ATCGGTCTGT TCTACCTGAT GGCCGGCCTC TTCACCTTCG CGGTCGGCCA GAGCCTGGGC
CAGACCGCCC TGCTGGCGAC TCTGGTGCTG CTGGCCGGGA TGAGCGTCAA CGGCGCGCAG
TCGGCCATGC CGTCCCTGGC GGCGCGCTTC TACCCGACCC ACGGCCGCGC CACCGGCGTG
TCCTGGATGC TCGGCATCGG CCGTTTCGGC GCCATCCTCG GCGCCTGGAT CGGCGCGACC
CTGCTCGGTC TCGGCTGGAC CTTCGAGGAT GTGCTCGGCG CCCTGCTGCT GCCGGCCGGC
ATCGCCACCG CGGCGATCCT GATCAAGGGC CTGGTCAGCC ACGCCGACGC CACCTGA
 
Protein sequence
MSTPLALPGE AAASGRAPVP KTLDVQAFID SRPLGLYQWR IVLLCFLIVF LDGLDTAAMG 
FIAPALVQDW GIDRASLGPV MSAALIGMVF GALCSGPLAD RFGRKGVLVG SALLFGLFSL
ASAYSDNVGE LVVLRFLTGL GLGAAMPNAT TLLSEYTPVR HKSLLVTSMF CGFNLGMAAG
GFVSAWMIPA YGWHSLLLVG GVLPLLLALV LLFWLPESAR YLVARGHDVG RVRRVLRPIG
EEAAQARGFS IPEQRTEKAG GVFAVIFGGT FRVGTLLLWL TYFMGLVIVY LLTSWLPTLL
RDSGASMERA AFVGALFQFG GVLSAVAVGW AMDRMNPHKV IGLFYLMAGL FTFAVGQSLG
QTALLATLVL LAGMSVNGAQ SAMPSLAARF YPTHGRATGV SWMLGIGRFG AILGAWIGAT
LLGLGWTFED VLGALLLPAG IATAAILIKG LVSHADAT