Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_02690 |
Symbol | pcaK |
ID | 7759230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 253818 |
End bp | 255194 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643803194 |
Product | 4-hydroxybenzoate transporter PcaK |
Protein accession | YP_002797505 |
Protein GI | 226942432 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACTC CCCTTGCGCT TCCCGGCGAG GCCGCCGCAT CCGGCCGCGC CCCGGTTCCG AAAACCCTCG ACGTACAGGC CTTCATCGAT TCCCGGCCGC TCGGCCTCTA CCAGTGGCGC ATCGTTCTGC TGTGTTTCCT GATCGTCTTC CTCGACGGTC TGGATACCGC CGCCATGGGC TTCATCGCCC CGGCGCTGGT CCAGGACTGG GGCATCGACC GCGCCAGCCT CGGCCCGGTG ATGAGCGCCG CGCTGATCGG CATGGTGTTC GGCGCGCTCT GCTCCGGTCC GCTGGCCGAC CGCTTCGGTC GCAAGGGCGT GCTGGTCGGT TCGGCGCTGC TGTTCGGCCT GTTCAGCCTG GCGTCGGCCT ACAGCGATAA CGTCGGCGAA CTGGTGGTGC TGCGCTTTCT CACCGGTCTG GGACTCGGCG CGGCCATGCC CAACGCCACC ACGCTGCTGT CGGAATACAC CCCGGTGCGC CACAAGTCGC TGCTGGTGAC CAGCATGTTC TGCGGCTTCA ACCTGGGCAT GGCGGCCGGC GGCTTCGTCT CCGCCTGGAT GATCCCGGCC TATGGCTGGC ACAGCCTGCT GCTGGTCGGT GGCGTGCTGC CGCTGCTCCT GGCGCTGGTG CTGCTGTTCT GGCTGCCCGA GTCGGCCCGC TACCTGGTGG CGCGCGGTCA CGACGTCGGG CGTGTCCGCC GGGTGCTGCG GCCGATCGGC GAGGAAGCGG CGCAGGCCAG GGGCTTCAGC ATCCCCGAAC AGCGCACGGA GAAGGCCGGC GGCGTCTTCG CGGTGATCTT CGGCGGCACC TTCCGTGTCG GCACCCTGCT GCTCTGGCTC ACCTATTTCA TGGGCCTGGT GATCGTCTAT CTGCTGACCA GCTGGCTGCC CACGCTGCTG CGCGACAGCG GCGCGAGCAT GGAGCGGGCC GCCTTCGTCG GCGCGCTGTT CCAGTTCGGC GGCGTGCTCA GCGCGGTGGC GGTGGGCTGG GCCATGGACC GCATGAACCC GCACAAGGTG ATCGGTCTGT TCTACCTGAT GGCCGGCCTC TTCACCTTCG CGGTCGGCCA GAGCCTGGGC CAGACCGCCC TGCTGGCGAC TCTGGTGCTG CTGGCCGGGA TGAGCGTCAA CGGCGCGCAG TCGGCCATGC CGTCCCTGGC GGCGCGCTTC TACCCGACCC ACGGCCGCGC CACCGGCGTG TCCTGGATGC TCGGCATCGG CCGTTTCGGC GCCATCCTCG GCGCCTGGAT CGGCGCGACC CTGCTCGGTC TCGGCTGGAC CTTCGAGGAT GTGCTCGGCG CCCTGCTGCT GCCGGCCGGC ATCGCCACCG CGGCGATCCT GATCAAGGGC CTGGTCAGCC ACGCCGACGC CACCTGA
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Protein sequence | MSTPLALPGE AAASGRAPVP KTLDVQAFID SRPLGLYQWR IVLLCFLIVF LDGLDTAAMG FIAPALVQDW GIDRASLGPV MSAALIGMVF GALCSGPLAD RFGRKGVLVG SALLFGLFSL ASAYSDNVGE LVVLRFLTGL GLGAAMPNAT TLLSEYTPVR HKSLLVTSMF CGFNLGMAAG GFVSAWMIPA YGWHSLLLVG GVLPLLLALV LLFWLPESAR YLVARGHDVG RVRRVLRPIG EEAAQARGFS IPEQRTEKAG GVFAVIFGGT FRVGTLLLWL TYFMGLVIVY LLTSWLPTLL RDSGASMERA AFVGALFQFG GVLSAVAVGW AMDRMNPHKV IGLFYLMAGL FTFAVGQSLG QTALLATLVL LAGMSVNGAQ SAMPSLAARF YPTHGRATGV SWMLGIGRFG AILGAWIGAT LLGLGWTFED VLGALLLPAG IATAAILIKG LVSHADAT
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