Gene Avin_02220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_02220 
Symbol 
ID7759183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp213263 
End bp214153 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content63% 
IMG OID643803147 
ProductTranscriptional regulator, AraC-family 
Protein accessionYP_002797458 
Protein GI226942385 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAGTG GCGGCGTGAT GGACGACTTT TGCGAGCCGG TCAAACATTT CAGCGAGGCG 
GACATGCCGC TGGCGGGGCG GCGCGACCCC GATCGCTCAT CGCTTCCGGT CGTGGCCGAG
CGATATGGGT ATCCCAAGGG ACAACGGATT CCCGAACACT CGCATCGACG CGGTCAATTG
ATGTTCGTGA CTTCGGGCGG TCTGCGCGTG CAGACCCGGC GCGGCTATTG GACCATCCCT
CCCGGACGGG CCTGCTGGGT GCCCTGCGGT CTCAACCATA TCGCCGAATA CCCGCAGGCC
GCGGAATTGG CCGTCGCCTA CGTGCGTACC GACCTTTGCG AAATGCTGCC AAGCGATTGC
CGCGTTCTTA ATCTGGGCGC TTTGCTGCGC GAACTCGTCA TCGCCGCCTA CGACTTCGGC
TGGGATTACG GGATCGACAG TCATGAGGCG CGCGCCATGC TCGTATTGAT CGGCGAGATC
GGCCGGCAGA GCAGCGCCCC GCTGTTCATT CCCGAAGGCA GGGACAACCG TCTGCGACGG
GTGACGGCAT TCCTGCATCG TCACCCCGAC GACAAGCGAA GTCTCGAGGA ATGGGCTAGC
CAGGTCGGCG CCAGTGCCCG GACCCTGGCG CGCCTGTTTC GTAGCGAGAC CGGACTGTCG
TTCTCGCAAT GGCGTCAACA ACTTCACCTG ACTCGAGCCG TGGAAATGCT CCTCGAAGGC
GCCAGCGTCA CCCAGGTCGC CTATGCCCTG GGCTATGCCA GCCCCGGTAG TTTCAGCGCC
ATGTTCGCGC GCAGCATGGG AGAGCCGCCG AGCCTTTATT GTCGAGCCCG GCATGGGGCT
CTGGGAGTTG ATGTCCTGGA TCGTCATTGT TTTAAGAGGG CGATCCGGTA A
 
Protein sequence
MVSGGVMDDF CEPVKHFSEA DMPLAGRRDP DRSSLPVVAE RYGYPKGQRI PEHSHRRGQL 
MFVTSGGLRV QTRRGYWTIP PGRACWVPCG LNHIAEYPQA AELAVAYVRT DLCEMLPSDC
RVLNLGALLR ELVIAAYDFG WDYGIDSHEA RAMLVLIGEI GRQSSAPLFI PEGRDNRLRR
VTAFLHRHPD DKRSLEEWAS QVGASARTLA RLFRSETGLS FSQWRQQLHL TRAVEMLLEG
ASVTQVAYAL GYASPGSFSA MFARSMGEPP SLYCRARHGA LGVDVLDRHC FKRAIR