Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_02030 |
Symbol | hexR-3 |
ID | 7759164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 197463 |
End bp | 198329 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643803128 |
Product | transcriptional regulatory protein HexR |
Protein accession | YP_002797439 |
Protein GI | 226942366 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAATCTCT TGCAGCATAT TGCCCAATCC CGCGCCCTGC TGCGCAAGTC GGAACTCAAG GTGGCCGATC ATGTGTTGCT CGATCCGGCC GCGGCGATGC ACAGTTCGAT GGCCAGTCTG GCTCAGGAGG TCGGGGTCAG CGAGCCGACC ATCGTACGCT TCTGTCGGGC GATCGGCTGT ACCGGCTTCC AGGACCTGAA GCTGAAGCTG GCGCAGAGCC TGGCCGCCGG CGCCAGTTTC GGCCAGTTCG CCATCCATGA GAACGATTCG GTCGTCGACT TCAGCCTGAA GATCTTCGAC ACCACCCTGC ACACCCTGAT GGAGGTGCGC GAGCGGCTCG ATCCCGAGGC CTTGCAGCAC GCCATCGATG CCATCGCCAA AGCTCCGCGC ATCGAGTTCT ACGGCTTCGG CGCCTCCGGC GCGGTAGCCA TCGATGCCCA GCACAAGTTC TTCCGCCTGC TGCTCACCGC CGCCGCCTAT TCCGACCCGC ACATGCAGGC CATGTCGGCG GTGACCCTCA AGCCCGGCGA CGTGGCGATC TGCATCTCCC AGTCGGGGCG CTCCAAGGAT CTCCTGATCA CCGCCAACCT GGTCCGCGAG ACCGGGGCCA CCCTGGTCAC CCTGTGTCCC GGACAGACGC CGCTGGCCGA GCTGGCCGAC ATCAACGTGG CGATCGACGT CCATGAGGAC ACCGAGGTCT ACACCCCCCT GACCTCGCGC ATCGCCCATC TGGTGGTGAT CGACGTGCTG GCCATGGGCG TGGCCATGGC CCGCGGGCCG GATCTGGTCA ATCACCTGAA GAGCGTCAAG CGCAGCCTGC GCAGCCTGCG CCTGTCGCCC AAGGCGGTGC GCGCCGCCGA GGAGTGA
|
Protein sequence | MNLLQHIAQS RALLRKSELK VADHVLLDPA AAMHSSMASL AQEVGVSEPT IVRFCRAIGC TGFQDLKLKL AQSLAAGASF GQFAIHENDS VVDFSLKIFD TTLHTLMEVR ERLDPEALQH AIDAIAKAPR IEFYGFGASG AVAIDAQHKF FRLLLTAAAY SDPHMQAMSA VTLKPGDVAI CISQSGRSKD LLITANLVRE TGATLVTLCP GQTPLAELAD INVAIDVHED TEVYTPLTSR IAHLVVIDVL AMGVAMARGP DLVNHLKSVK RSLRSLRLSP KAVRAAEE
|
| |