Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_01980 |
Symbol | |
ID | 7759159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 192569 |
End bp | 193429 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643803123 |
Product | endonuclease/exonuclease/phosphatase family protein |
Protein accession | YP_002797434 |
Protein GI | 226942361 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.496471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCGCC GACGTACGGT TGAACGCCAG GCCGCGGTGC GGCAACCGCG GACCAACCCG CAGTGCCACG ATGCAAGCGA GCTGACTGGC GACGGTCGGC TGCGCCTGCT GAGTTTCAAC ATCCAGGTCG GTATCCGCAC CGAGAATTAT CGGCACTATC TGACCCGCAG TTGGCAGCAC CTGCTGCCGC ATGCCGGGCG CGCCGTGAAT CTGCAGCGGA TCGGCGCCCT GCTCGCCGAC TTCGACCTGG TGGCCCTGCA GGAGGTCGAC GGCGGCAGCC TGCGCTCCGA TTATGTCAAC CAGGTGGAAC ACCTCGCCCA GCTCGGCAAC TTCCCCTACT GGTACCAGCA GCTCAACCGC AACCTCGGCC CGCTGGCCCA GCACAGCAAC GGCCTGCTCA GCCGCCTGCG ACCTTCCGGG CTGGAGGATC ACCCGTTGCC CGGCCCACCG GGACGCGGCG CGATACTCCT GCGGCTCGGC GAAGGAGCCG GCTCCCTGGC GGTGATCATG ATGCATCTGG CCCTTGGCGC CCGGACGCGC ACCCGCCAGC TCGCCTACAT CCGCGAACTG GTCGGCGACT ATCGCCACCT GGTACTGATG GGCGACATGA ACACCCATGC CCGCGAACTG CTGGAACACT CGCCCCTGCG CGATCTCGGC CTGCTCGCCC CACAGATCGA GGCAACCTTT CCCAGTTGGC GCCCGCAGCG CTGCATCGAC CACATCCTGC TCAGCCCCAG CCTGACGCTG GAACGGGTAC AGGTGCTGCC CCAACCGATC TCCGATCACC TGCCGGTAGC GGTGGAGATC CGCCTGCCCG AACACCTCGG GCACGGCACC CTGCCCCAGC TCCAACCCTG A
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Protein sequence | MLRRRTVERQ AAVRQPRTNP QCHDASELTG DGRLRLLSFN IQVGIRTENY RHYLTRSWQH LLPHAGRAVN LQRIGALLAD FDLVALQEVD GGSLRSDYVN QVEHLAQLGN FPYWYQQLNR NLGPLAQHSN GLLSRLRPSG LEDHPLPGPP GRGAILLRLG EGAGSLAVIM MHLALGARTR TRQLAYIREL VGDYRHLVLM GDMNTHAREL LEHSPLRDLG LLAPQIEATF PSWRPQRCID HILLSPSLTL ERVQVLPQPI SDHLPVAVEI RLPEHLGHGT LPQLQP
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