| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_01890 |
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| Symbol | |
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| ID | 7759150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 184046 |
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| End bp | 187186 |
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| Gene Length | 3141 bp |
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| Protein Length | 1046 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643803114 |
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| Product | Hydrophobe/amphiphile efflux-1 HAE1 |
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| Protein accession | YP_002797425 |
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| Protein GI | 226942352 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGGAT TTTTTATCGA TCGCCCTATC TTTGCCTGGG TGATTGCCTT GGTGATCATG
TTGGCTGGTG GGCTATCCAT TCTTGGGTTG CCAATCAATC AATATCCAAG TATCGCTCCG
CCGGCGGTGA GCATTTCCGT GACCTATCCG GGCGCTTCGG CACAGACCGT TCAGGATACG
GTAGTGCAAG TGATCGAGCA GCAGCTCAAC GGTATCGACA ACCTGCGCTA CATCACTTCG
GACAGCAATT CGGATGGCAA CATGACCATC ACTGCCACCT TCGAACCCGG TACCGATGCG
GACATTGCCC AGGTTCAGGT TCAGAACAAA CTGCAACTGG CCACCCCGCT GTTGCCACAG
GAGGTTCAGC AGCAGGGCAT CCGAGTGACC AAGTCGGTGC GAAACTTTCT CTTGATCGTT
GGCTTCGTTT CCGAAGATGG CAGTATGGAC CGCAACGATC TGGCCAACTA TATCGTTTCC
AATATTCAGG ATCCCCTTTC CCGGGCCAAG GGCGTGGGTG ATTTCCAGGT CTTCGGCTCG
CAATATGCCA TGCGCATCTG GCTGGACCCG GCCCGCCTGA ACAACTTCCA GTTGACTCCG
GTGGATGTGC GCAACGCGGT CGAGAGCCAG AATGTCCAGG TTTCCTCCGG CCAGTTCGGC
GGTCTTCCGG CCGTACCCGA CCAGCAACTC AGTGCCACGA TCATCGGCAA GACCCGTCTG
CAGACAGCCG AGCAGTTTCG CGACATCCTG CTTAAAGTCA ATGGCGACGG CTCGCAGGTG
CGCCTGGACG ATGTCGCCGA GGTGGGACTG GGTGGTGAGA ATTACAGCAT CACTTCGACC
TACAACGGGC GGCCCGCCGC GGGAATGGCG ATCAGGCTCG CGACCGATGC CAACGCACTG
GAAACGGCCC AGGCGGTGCG GGATACCCTC GCCGAACTGG AGCCTTTTTT CCCGCCGGGG
GTGAAAGTCG TCTACCCCTA TGACACTACG CCGGTGATCT CGGCCTCCAT CGAGGAGGTG
GTGAAAACCC TCGGCGAGGC GATCGTCCTG GTCTTTCTGG TGATGTACCT GTTTCTGCAG
AACGTCCGGG CCACGCTGAT TCCGACCCTG GCGGTCCCGG TGGTGCTGCT CGGCACCTTT
GGTGTGCTCG CCGCATTCGG TTTCACCATC AATACCCTGA CCATGTTCGC CATGGTGCTG
GCCATCGGTC TGCTGGTCGA TGACGCCATC GTGGTAGTCG AGAACGTCGA GCGGGTCATG
GTCGAGGATG GCTTGCCACC GCGGGAGGCC ACACGCAAGT CGATGGGACA GATCCAGGGT
GCTTTGGTCG GCATTGCCTT GGTGCTGTCC GCAGTGTTCG TACCCATGGC CTTTTTCGGT
GGCTCGACCG GGGTAATCTA TCGACAGTTC TCCATCACCA TCGTCGCTGC CATGGCGCTA
TCGGTACTGG TCGCGCTGAT CTTCACCCCG GCGCTCTGTG CGACTCTGCT CAAGCCCGTG
AGCAGAGGCG AGCATCACCG GAAGCGTGGT TTCTTCGGCT GGTTCAACCG CAGCTTCGAG
CGCAGTGTCC GAGGTTACGA GCGTGGCGTC AGGCAGGTGC TCGGCCGCAA GCTACCTTAT
CTGTTGCTCT ACTTGGCAAT AGTCGCGCTC ATGGTTTGGT TGTTCAGCCG TATACCGACC
GCTTTCCTGC CCGACGAGGA TCAAGGCGTG CTCTACGCGC AAGTGCAGAC CCCCTCGGGG
TCCAGCGCTG AGCGAACCCA ACTGGTGGTG GACGAAATGC GCAATTACCT GCTGACGGAG
GAGGGTCATC TGGTCAACTC GGTTTTCACC GTCACCGGCT TCAATTTCGC AGGCCGGGGG
CAGAGTTCCG GCTTGGCATT CATCTCATTG AAGCCTTGGG CCGAGCGGAC CGGTGAAGAA
GATGATGTGT TTGCCCTCGC CCAGCGTGCC CAGCAGCGCT TTGCCGGGTT TCGCGACGCC
CTGGCCTTCG CTTATGCTCC ACCGGCGGTG ATGGAGTTGG GCAATGCCAG TGGCTTCGAT
GTCTTTTTGC AGGACCGCGC CGGCGTCGGC CACGAAGCGT TGAGCGCAGC CCGCGACCAG
TTTCTCGCCC GCGCTGCGAA GAATCCCGTG CTCAGCCGGG TACGTGCCAA TGGTCTGCGC
GACGAGCCGC AGTATCGCCT GTTGATCGAT GACGAACTGG CCCGTGCCTA TGGTGTCCCC
CTGGCGGACA TCAACAGCAG CATCTCCATC GCCTGGGGTG CCAGCTACGT CAACGATTTC
ATCGATCGGG GACGGGTGAA GAAGGTCTAT CTGCAGGGCG AGCCGAAGGC ACGCATGACT
CCCGAAGACC TCGGCAAGTG GTTCGTGCGC AATGCGGCCG GCACCATGGT GCCCTTCAGT
GCTTTCGCCA ACGGCGAGTG GACCTACGGT CCGCCGAAAC TGGCCCGTTA CAATGGCGTC
TCGGCGATGG AGATTCTCGG CGAGCCGGCA CCCGGTTACA GCTCCGGGGA GGCCATGGCC
GAGGTGGAAC GGATCGCCGA GGAATTGCCG CCGGGTATCG GTTACGCCTG GACCGGCCTG
TCCTACGAAG AGCGTCTTTC CGGATCCCAG GCGCCAGCGC TCTACGCACT CTCGCTGCTG
GTGGTGTTCC TTTGCCTGGC GGCCCTCTAC GAAAGCTGGT CGATTCCTTT CTCGGTGATG
CTGGTCGTGC CGCTGGGAGT CATAGGCGCG CTCTGCTTCA CCAGCCTGCG CGGACTCTCC
AATGATGTTT ACTTCCAGGT GGGCCTGCTC ACCACCGTCG GCTTGTCGGC GAAGAATGCG
ATCCTCATCG TCGAGTTTGC CAAGGACCTG CACGAGCAGG GTATGGCGCT CCCGGAGGCA
GCAGTGGAGG CCTGCCGCAT GCGCCTGCGG CCGATCATCA TGACTTCTCT GGCATTCATC
CTCGGTGTCG TGCCGCTGGC CGTCTCCAGC GGTGCCGGTG CCGGTGCCGG CAGCCAGCAT
GCCATCGGTA CGGGAGTGAT CGGCGGCATG CTCACCGCCA CGGTGCTGGC GATCTTCTGG
GTGCCGCTAT TCTACGTATT GGTGTCATCC CTGTTCGGGG ATCGTCGCCC CGAGGCTGCC
GACCGCGGTG AGGTGCCATG A
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| Protein sequence | MSGFFIDRPI FAWVIALVIM LAGGLSILGL PINQYPSIAP PAVSISVTYP GASAQTVQDT
VVQVIEQQLN GIDNLRYITS DSNSDGNMTI TATFEPGTDA DIAQVQVQNK LQLATPLLPQ
EVQQQGIRVT KSVRNFLLIV GFVSEDGSMD RNDLANYIVS NIQDPLSRAK GVGDFQVFGS
QYAMRIWLDP ARLNNFQLTP VDVRNAVESQ NVQVSSGQFG GLPAVPDQQL SATIIGKTRL
QTAEQFRDIL LKVNGDGSQV RLDDVAEVGL GGENYSITST YNGRPAAGMA IRLATDANAL
ETAQAVRDTL AELEPFFPPG VKVVYPYDTT PVISASIEEV VKTLGEAIVL VFLVMYLFLQ
NVRATLIPTL AVPVVLLGTF GVLAAFGFTI NTLTMFAMVL AIGLLVDDAI VVVENVERVM
VEDGLPPREA TRKSMGQIQG ALVGIALVLS AVFVPMAFFG GSTGVIYRQF SITIVAAMAL
SVLVALIFTP ALCATLLKPV SRGEHHRKRG FFGWFNRSFE RSVRGYERGV RQVLGRKLPY
LLLYLAIVAL MVWLFSRIPT AFLPDEDQGV LYAQVQTPSG SSAERTQLVV DEMRNYLLTE
EGHLVNSVFT VTGFNFAGRG QSSGLAFISL KPWAERTGEE DDVFALAQRA QQRFAGFRDA
LAFAYAPPAV MELGNASGFD VFLQDRAGVG HEALSAARDQ FLARAAKNPV LSRVRANGLR
DEPQYRLLID DELARAYGVP LADINSSISI AWGASYVNDF IDRGRVKKVY LQGEPKARMT
PEDLGKWFVR NAAGTMVPFS AFANGEWTYG PPKLARYNGV SAMEILGEPA PGYSSGEAMA
EVERIAEELP PGIGYAWTGL SYEERLSGSQ APALYALSLL VVFLCLAALY ESWSIPFSVM
LVVPLGVIGA LCFTSLRGLS NDVYFQVGLL TTVGLSAKNA ILIVEFAKDL HEQGMALPEA
AVEACRMRLR PIIMTSLAFI LGVVPLAVSS GAGAGAGSQH AIGTGVIGGM LTATVLAIFW
VPLFYVLVSS LFGDRRPEAA DRGEVP
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