Gene Avin_01860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_01860 
Symbol 
ID7759148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp174996 
End bp176168 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content65% 
IMG OID643803107 
ProductNAD(P) transhydrogenase, subunit alpha part 1 
Protein accessionYP_002797423 
Protein GI226942350 
COG category[C] Energy production and conversion 
COG ID[COG3288] NAD/NADP transhydrogenase alpha subunit 
TIGRFAM ID[TIGR00561] NAD(P) transhydrogenase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0301243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCATATTG GCGTTCCACT AGAGACCCTC ATCGGGGAAA CAAGGGTTGC CGCGACACCG 
GAGACCGTGA AGAAGCTGGT CAGCCAGGGT CACGCTGTCA CTGTGCAAAG CGGGGCCGGT
CTCAATGCCA GCCTTCCGGA CAGTGCATTC GAAGCGGCTG GCGCCAGGAT CGGCGATGCA
GCGACGGCTT TCGGCGCCGA CATCGTGCTC AAGGTCGTGG CTCCCACCCC GGCAGAATTG
GCCCAGATGA GAGCTGGCAC AGTGCTGATC GGCATGCTCA ACCCGTTCGA TGATGGCAAC
ATCGCACGCA TGGCCGACAG CGGCATCACC GCCTTCGCGC TGGAGGCGGC ACCACGTACC
TCGCGAGCAC AGAGCCTCGA CGTGTTGTCC TCACAGGCCA ACATCGCCGG CTACAAGGCC
GTCATCCTCG CAGCCAATCA CTACCCACGC TTCATGCCGA TGCTGATGAC CGCCGCAGGC
ACGGTGAAAG CCGCTCGCGT GCTGATTCTC GGCGCCGGCG TCGCCGGTCT GCAGGCAATC
GCCACGGCCA AGCGCCTGGG CGCCGTGATC GAAGCCTCCG ATGTGCGCCC GGCGGTGAAG
GAGCAGATCG AGTCCCTCGG CGCCAAGTTC GTCGATGTCC CCTTCGAAAC CGAGGAGGAA
CGCCAGTGTG CCGAAGGCGT GGGCGGCTAT GCCCGGCCGA TGCCGGCATC CTGGATGGAG
CGCCAGGCCA AGGCGGTACA TGAACGCGCC AAGCAGGCCG ATATCGTCAT CACCACTGCG
CTGATTCCCG GCCGCAAGGC ACCGACCCTG CTGCACGAAG CCACCGTACA GGAAATGAAG
CCGGGCTCGG TGGTCGTCGA TCTCGCCGCC GCACAGGGCG GCAACTGTCC GTTGACGGTA
CCCGACGAAG TAGTGGTCCG CCACGGCGTG ACCATCGTCG GCCACAGCAA CCTGCCGGCC
CTGGTAGCGG CCGACGCCTC TGCACTCTAC GCGCGTAACC TGCTGGATTT CCTCAAGTTG
GTGGTCGACA AGGAAGGCCA CTTCCACCTC GACCTGGAAG ACGACATCGT CAAGGCCTGC
CTGATGTGCG AAGGCGGCCG GGTCGTGCGG AACAATGGCG GAGCCTCCGG CCCGTCGACC
ACCACCGTGC AGGCAACGAA AGAAAACGCA TAA
 
Protein sequence
MHIGVPLETL IGETRVAATP ETVKKLVSQG HAVTVQSGAG LNASLPDSAF EAAGARIGDA 
ATAFGADIVL KVVAPTPAEL AQMRAGTVLI GMLNPFDDGN IARMADSGIT AFALEAAPRT
SRAQSLDVLS SQANIAGYKA VILAANHYPR FMPMLMTAAG TVKAARVLIL GAGVAGLQAI
ATAKRLGAVI EASDVRPAVK EQIESLGAKF VDVPFETEEE RQCAEGVGGY ARPMPASWME
RQAKAVHERA KQADIVITTA LIPGRKAPTL LHEATVQEMK PGSVVVDLAA AQGGNCPLTV
PDEVVVRHGV TIVGHSNLPA LVAADASALY ARNLLDFLKL VVDKEGHFHL DLEDDIVKAC
LMCEGGRVVR NNGGASGPST TTVQATKENA