| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_01390 |
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| Symbol | nifD |
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| ID | 7759104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 137758 |
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| End bp | 139236 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643803063 |
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| Product | Nitrogenase molybdenum-iron protein alpha chain:Nitrogenase component I, alpha chain |
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| Protein accession | YP_002797379 |
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| Protein GI | 226942306 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
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| TIGRFAM ID | [TIGR01282] nitrogenase molybdenum-iron protein alpha chain
[TIGR01862] nitrogenase component I, alpha chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCGGTA TGTCGCGCGA AGAGGTTGAA TCCCTCATCC AGGAAGTTCT GGAAGTTTAT
CCCGAGAAGG CTCGCAAGGA TCGTAACAAG CACCTGGCCG TCAACGACCC GGCGGTTACC
CAGTCCAAGA AGTGCATCAT CTCCAACAAG AAGTCCCAGC CCGGTCTGAT GACCATCCGC
GGCTGCGCCT ACGCCGGTTC CAAAGGCGTG GTCTGGGGCC CCATCAAGGA CATGATCCAC
ATCTCCCACG GTCCGGTAGG CTGCGGCCAG TATTCGCGCG CCGGCCGTCG TAACTACTAC
ATCGGTACCA CCGGTGTGAA CGCCTTCGTC ACCATGAACT TCACCTCGGA CTTCCAGGAG
AAGGACATCG TGTTCGGTGG CGACAAGAAG CTCGCCAAAC TGATCGACGA AGTGGAAACC
CTGTTCCCGC TGAACAAGGG TATCTCCGTC CAGTCCGAGT GCCCGATCGG CCTGATCGGC
GACGACATCG AATCCGTGTC CAAGGTCAAG GGCGCCGAGC TCAGCAAGAC CATCGTACCG
GTCCGTTGCG AAGGCTTCCG CGGCGTTTCC CAGTCCCTGG GCCACCACAT CGCCAACGAC
GCAGTCCGCG ACTGGGTCCT GGGCAAGCGT GACGAAGACA CCACCTTCGC CAGCACTCCT
TACGATGTGG CCATCATCGG CGACTACAAC ATCGGCGGCG ACGCCTGGTC TTCCCGCATC
CTGCTGGAAG AAATGGGCCT GCGTTGCGTA GCCCAGTGGT CCGGCGACGG CTCCATCTCC
GAAATCGAGC TGACCCCGAA GGTCAAGCTG AACCTGGTTC ACTGCTACCG CTCGATGAAC
TACATCTCCC GTCACATGGA AGAGAAGTAC GGTATCCCAT GGATGGAGTA CAACTTCTTC
GGCCCGACCA AGACCATCGA GTCGCTGCGT GCCATCGCCG CCAAGTTCGA CGAGAGCATC
CAGAAGAAGT GCGAAGAGGT CATCGCCAAG TACAAGCCCG AGTGGGAAGC GGTGGTCGCC
AAGTACCGTC CGCGCCTGGA AGGCAAGCGC GTCATGCTCT ACATCGGTGG CCTGCGTCCG
CGCCACGTGA TCGGCGCCTA CGAAGACCTG GGCATGGAAG TGGTGGGTAC CGGCTACGAG
TTCGCCCACA ACGACGACTA TGACCGCACC ATGAAAGAAA TGGGTGACTC CACCCTGCTG
TACGATGACG TGACCGGCTA CGAATTCGAA GAATTCGTCA AGCGCATCAA GCCCGACCTG
ATCGGCTCCG GTATCAAGGA GAAGTTCATC TTCCAGAAGA TGGGCATCCC CTTCCGTCAA
ATGCACTCCT GGGATTATTC CGGCCCCTAC CACGGCTTCG ATGGCTTCGC CATCTTCGCC
CGTGACATGG ACATGACCCT GAACAATCCG TGCTGGAAGA AACTGCAGGC TCCCTGGGAA
GCTTCCGAAG GCGCCGAGAA AGTCGCCGCC AGCGCCTGA
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| Protein sequence | MTGMSREEVE SLIQEVLEVY PEKARKDRNK HLAVNDPAVT QSKKCIISNK KSQPGLMTIR
GCAYAGSKGV VWGPIKDMIH ISHGPVGCGQ YSRAGRRNYY IGTTGVNAFV TMNFTSDFQE
KDIVFGGDKK LAKLIDEVET LFPLNKGISV QSECPIGLIG DDIESVSKVK GAELSKTIVP
VRCEGFRGVS QSLGHHIAND AVRDWVLGKR DEDTTFASTP YDVAIIGDYN IGGDAWSSRI
LLEEMGLRCV AQWSGDGSIS EIELTPKVKL NLVHCYRSMN YISRHMEEKY GIPWMEYNFF
GPTKTIESLR AIAAKFDESI QKKCEEVIAK YKPEWEAVVA KYRPRLEGKR VMLYIGGLRP
RHVIGAYEDL GMEVVGTGYE FAHNDDYDRT MKEMGDSTLL YDDVTGYEFE EFVKRIKPDL
IGSGIKEKFI FQKMGIPFRQ MHSWDYSGPY HGFDGFAIFA RDMDMTLNNP CWKKLQAPWE
ASEGAEKVAA SA
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