| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_00450 |
|---|
| Symbol | |
|---|
| ID | 7759012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 45090 |
|---|
| End bp | 46118 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643802971 |
|---|
| Product | ABC transporter, periplasmic binding protein |
|---|
| Protein accession | YP_002797287 |
|---|
| Protein GI | 226942214 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.123713 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAT CAGTCTCTTG CCCGCGTTTC GGTCTGTTTT TGCTGCTGGG GTTGTCCCTG
GCCACGGCCC AGGCGCGTCA GCTTACCGAT ATGAGCGGCC GTACCGAGGA GATTCCCGAG
CGGCCGCAGC GGGTGTTCCC CGCTGTGACC ATGATGACGC CGGTGATGGC CGCCCTGGCG
CCGGAACTGA TGACCGGGCT GGCGTTTCGC CTGGCTCCGG GCGCCGAGGC CTTCCTGCCG
GCCGGGGTGG CCGGGTTGCC CGTGGTTCCG GTGCTGGAGG ACATGAACGC CGAGGCCATC
CTGGTCATGC GTCCGGACCT GGCGATCGGC TGGAGCGGCG CCGGTCCCCT GATGCGGCGC
ACCGAGACGC TGATGCAGCG TCTGCGGATT CCGGCGCTGT TCTACAAGGG CGAACGCCTC
GACGAATACC CGGCGACTTT CCGGGCGCTG GGCGATGCTC TGGGACGGAA GGTGCGCGGC
GAGCGACTGG CGCGCTATCT GGAGGACAGC CAGGTCCGTT TGCGGCAGGC CCTGCGGGAT
CTGCCGGAAA GCGAACGGCC ACGGGTCTAC TACGCCGAAA GTCCCGACGG CCTGACCACC
CAATGCGACA GCACCAGCCG CATGGAGGTG ATCCGCCTGG CCGGTGGCGT TCCGGCGCTG
TCCTGCGCCG ACAAGGGGTT CGCCACCAGC AGGGAGGTCG ATTTCGAAAC CCTGCTGGAA
TTGGACCCGG ACGTCGTCGT GGCGCGCAAT CCGGACAGCG CGGCCCGGCT GCGCGGCGAG
CCGCGCTGGC AACTGCTGCG AGCCGTGCGC GAGGGAAGGG TCTACGGGAT TCCCGAACTG
CCCTTCAACT GGTTCGACCG GCCGCCCTCC TTCATGCGCG CGCTGGGCGC GCACTGGCTG
GCGCGCCTGC TGCACCCGCG GCGCTTCGAC GAGGATATCC GCAGCGAAGC CGTGCGCTTC
AACCAGGTGT TCTTCGGCAT CGAACCGCCA GCCGCCGCGC TCGATCGACT GCTGGAGCCG
CGCTCATGA
|
|---|
| Protein sequence | MMKSVSCPRF GLFLLLGLSL ATAQARQLTD MSGRTEEIPE RPQRVFPAVT MMTPVMAALA
PELMTGLAFR LAPGAEAFLP AGVAGLPVVP VLEDMNAEAI LVMRPDLAIG WSGAGPLMRR
TETLMQRLRI PALFYKGERL DEYPATFRAL GDALGRKVRG ERLARYLEDS QVRLRQALRD
LPESERPRVY YAESPDGLTT QCDSTSRMEV IRLAGGVPAL SCADKGFATS REVDFETLLE
LDPDVVVARN PDSAARLRGE PRWQLLRAVR EGRVYGIPEL PFNWFDRPPS FMRALGAHWL
ARLLHPRRFD EDIRSEAVRF NQVFFGIEPP AAALDRLLEP RS
|
|---|
| |