Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_00420 |
Symbol | |
ID | 7759009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 41764 |
End bp | 43158 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643802968 |
Product | GGDEF domain protein |
Protein accession | YP_002797284 |
Protein GI | 226942211 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGGTA TCTCCCCGGA ACAACAGGCC GCAGAATGGA AACTATTGCT AGGGCAATTT CCCGCCCCGG TCGTCGCCCA GATCAGGGAG TTGGCCACTA CCCACCAGTC CGAACTGCCC GGGTATTTCT ATGAGCAGAT GCTGCAGGAC GAACAGGCCA TGCTCTTCCT CACCCACGAG CAGGTGAAGA GCCGTCTGCA CGGCACCCTG CGGCAATGGA TCGTCTCGGT ATTCTCCATG AGCGACGACG ATGCCGCGCT GCAGGCGCTG ATCGCCCAGC AGAAGCAGAT CGGCGAGATC CATGCGCGCA TCAAGATCCC CATCCATCTG GTGCTGCGCG GCGCCCGGCA TCTGCGCGAG CGGCTGTTCG TCCTGCTCCG CCAGCGTCCC CTCGATCCCG AACACAAGCT CTTCGGCCAG CGCCTGATCA GCGAAACCGT CGACCTGGCC ATGGAAATCA TGAGCCGGGC CTTCTCCGAC GCCTACGACC GCAACTCGCG CAGCGAGGAG GGATACCGGC TGTTCTCGGT GGCGCAGAAC ATCGGCATCG AACAGGAGCG CCAGCGTTCC GCCCTGCTCG ACTGGGAAAA CCACCTGATG TTCGACCTGG CGGTCGGCCA ACTCGCCACG CAGTTGCCCA GGCTGTCCAA CTCCGAGTTC GGCCTGTGGT TCCGCCACAA GGGAGCCCAT GCCTTCCAGG GTTCGCGGGA AACCGAACTG ATCCTGGAGG GCATGCGGCA GATCGACGAG GTGCTGCTGC CGCTGTTCGG GCAGCCGGCG GCCGGGGCGG ACGCGGACCA GCGCCTGCAG AACCTGCGCC TGCTGCGCGA GCAGACCAAG GGCATCATCT TCCACCTGGA CAACCTGTTC GAGCAGGCCA ATGTCCTGGA GAGCGGCCGC GATGTGCTGA CGCACATGCT CAACCGCAAG TTCCTGCCGG TGATCCTGGC CAAGGAAGTG GCCTATGCGC GGCAGAACGA GCGCTCCTTC GCCGTGCTGG CCGTGGACAT CGACCGCTTC AAGCACATCA ACGACGAATT CGGCCACGAG GCCGGCGACG TGGTCCTGCA GCAGCTCGCC TCCCTGCTCA GCAACCATTG CCGCGGCGGC GACTACGTGT TCCGCATGGG CGGCGAGGAG TTTCTCGTGC TGCTGGTCGA CGTCACCCAG GCGCATGCGC TCGGGGTGGC CGAGAAGCTG CGCCAGCAGG CTGCGCAGGA GCGCTTCCGC CTGCCGGGCG AGCAGGACCT GCAACTGACC GTGAGCATCG GCGTGGCCCT GCACGACGGC CATCCGGATT ATCAGCACCT GCTGCGCCAG GCCGACCGGG CGCTGTACGA GGCCAAGCAC GGCGGACGCA ACCAGGTGGT GCTGGCCCGG AAGCTGGATG GCTGA
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Protein sequence | MPGISPEQQA AEWKLLLGQF PAPVVAQIRE LATTHQSELP GYFYEQMLQD EQAMLFLTHE QVKSRLHGTL RQWIVSVFSM SDDDAALQAL IAQQKQIGEI HARIKIPIHL VLRGARHLRE RLFVLLRQRP LDPEHKLFGQ RLISETVDLA MEIMSRAFSD AYDRNSRSEE GYRLFSVAQN IGIEQERQRS ALLDWENHLM FDLAVGQLAT QLPRLSNSEF GLWFRHKGAH AFQGSRETEL ILEGMRQIDE VLLPLFGQPA AGADADQRLQ NLRLLREQTK GIIFHLDNLF EQANVLESGR DVLTHMLNRK FLPVILAKEV AYARQNERSF AVLAVDIDRF KHINDEFGHE AGDVVLQQLA SLLSNHCRGG DYVFRMGGEE FLVLLVDVTQ AHALGVAEKL RQQAAQERFR LPGEQDLQLT VSIGVALHDG HPDYQHLLRQ ADRALYEAKH GGRNQVVLAR KLDG
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