Gene Avin_00420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_00420 
Symbol 
ID7759009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp41764 
End bp43158 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content65% 
IMG OID643802968 
ProductGGDEF domain protein 
Protein accessionYP_002797284 
Protein GI226942211 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGGTA TCTCCCCGGA ACAACAGGCC GCAGAATGGA AACTATTGCT AGGGCAATTT 
CCCGCCCCGG TCGTCGCCCA GATCAGGGAG TTGGCCACTA CCCACCAGTC CGAACTGCCC
GGGTATTTCT ATGAGCAGAT GCTGCAGGAC GAACAGGCCA TGCTCTTCCT CACCCACGAG
CAGGTGAAGA GCCGTCTGCA CGGCACCCTG CGGCAATGGA TCGTCTCGGT ATTCTCCATG
AGCGACGACG ATGCCGCGCT GCAGGCGCTG ATCGCCCAGC AGAAGCAGAT CGGCGAGATC
CATGCGCGCA TCAAGATCCC CATCCATCTG GTGCTGCGCG GCGCCCGGCA TCTGCGCGAG
CGGCTGTTCG TCCTGCTCCG CCAGCGTCCC CTCGATCCCG AACACAAGCT CTTCGGCCAG
CGCCTGATCA GCGAAACCGT CGACCTGGCC ATGGAAATCA TGAGCCGGGC CTTCTCCGAC
GCCTACGACC GCAACTCGCG CAGCGAGGAG GGATACCGGC TGTTCTCGGT GGCGCAGAAC
ATCGGCATCG AACAGGAGCG CCAGCGTTCC GCCCTGCTCG ACTGGGAAAA CCACCTGATG
TTCGACCTGG CGGTCGGCCA ACTCGCCACG CAGTTGCCCA GGCTGTCCAA CTCCGAGTTC
GGCCTGTGGT TCCGCCACAA GGGAGCCCAT GCCTTCCAGG GTTCGCGGGA AACCGAACTG
ATCCTGGAGG GCATGCGGCA GATCGACGAG GTGCTGCTGC CGCTGTTCGG GCAGCCGGCG
GCCGGGGCGG ACGCGGACCA GCGCCTGCAG AACCTGCGCC TGCTGCGCGA GCAGACCAAG
GGCATCATCT TCCACCTGGA CAACCTGTTC GAGCAGGCCA ATGTCCTGGA GAGCGGCCGC
GATGTGCTGA CGCACATGCT CAACCGCAAG TTCCTGCCGG TGATCCTGGC CAAGGAAGTG
GCCTATGCGC GGCAGAACGA GCGCTCCTTC GCCGTGCTGG CCGTGGACAT CGACCGCTTC
AAGCACATCA ACGACGAATT CGGCCACGAG GCCGGCGACG TGGTCCTGCA GCAGCTCGCC
TCCCTGCTCA GCAACCATTG CCGCGGCGGC GACTACGTGT TCCGCATGGG CGGCGAGGAG
TTTCTCGTGC TGCTGGTCGA CGTCACCCAG GCGCATGCGC TCGGGGTGGC CGAGAAGCTG
CGCCAGCAGG CTGCGCAGGA GCGCTTCCGC CTGCCGGGCG AGCAGGACCT GCAACTGACC
GTGAGCATCG GCGTGGCCCT GCACGACGGC CATCCGGATT ATCAGCACCT GCTGCGCCAG
GCCGACCGGG CGCTGTACGA GGCCAAGCAC GGCGGACGCA ACCAGGTGGT GCTGGCCCGG
AAGCTGGATG GCTGA
 
Protein sequence
MPGISPEQQA AEWKLLLGQF PAPVVAQIRE LATTHQSELP GYFYEQMLQD EQAMLFLTHE 
QVKSRLHGTL RQWIVSVFSM SDDDAALQAL IAQQKQIGEI HARIKIPIHL VLRGARHLRE
RLFVLLRQRP LDPEHKLFGQ RLISETVDLA MEIMSRAFSD AYDRNSRSEE GYRLFSVAQN
IGIEQERQRS ALLDWENHLM FDLAVGQLAT QLPRLSNSEF GLWFRHKGAH AFQGSRETEL
ILEGMRQIDE VLLPLFGQPA AGADADQRLQ NLRLLREQTK GIIFHLDNLF EQANVLESGR
DVLTHMLNRK FLPVILAKEV AYARQNERSF AVLAVDIDRF KHINDEFGHE AGDVVLQQLA
SLLSNHCRGG DYVFRMGGEE FLVLLVDVTQ AHALGVAEKL RQQAAQERFR LPGEQDLQLT
VSIGVALHDG HPDYQHLLRQ ADRALYEAKH GGRNQVVLAR KLDG