Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_00370 |
Symbol | |
ID | 7759004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 36540 |
End bp | 38129 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643802963 |
Product | hypothetical protein with C-terminal GGDEF motif |
Protein accession | YP_002797279 |
Protein GI | 226942206 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCGCC TCGATCTGCG CCGACTGATC CTGCTGCTGA CGATCGCCGC CACCCTGCTG ACCCTCCTCA ACAGCTTCCA CGCCAGCTAC CGGACCCTGC ACCGCCAACT GATCGCCCAG ACGCTGGAGG CCAACCGCGC CTATGCCGCC AAGCTGGCCC ACAGCACCGA CAATTTCCTC AAGGCGGCTC AGCAGCAGCT CGCCTACAGC GCCGCCCTGC TGCCGGAGCT GTTCGACCGG CCGGAACGGC TCGACGCCGA AGTCACACGC CTGAAGGGAC AGACCGGCAC CTTCAACGGC GTCTTCATCG TACGCACCGA TGGCCGGGTG CTGGCCACCG CGCCGAACAG TCTGGGGCTG GTCGGCGGCG TGCTGAAGAC CCGGGAGATG CTGGCGGCCC TGAGCGCGCG CCAACCGAGG ATCAGCGCCC CCTATGCCGG TGTCCGCGGG TATTTGCTGG TCTTCCTCTC GCAACCGGTC TTCGCCCGGG ACGGCCGCTA CCTGGGCTAT GTCGGCGGTG CCATCCACCT GGGGAAACAC GACGGCAGCC TGCAGGCGCT GCTCGGCAAC CACTACTACC AGGATGGTTC GCAACTGTAC GTGGTGGACG CCAACCGGCA CCTGCTCCAC CACCAGGACC CGTCCCGGAT CGGCGAGGTC GTCACCGGCA ATCCGGCGGT CGAGGCCGTG CTGCGCGGCG AGGAGGGCAG CCGGCAACTG CTCGACTCGC AGCGGACCGA CATGCTCGCC GGCTATGCCC CGGTCGCCAG CACCGGCTGG GGCGTGGTCG CCCAGCGCCC CAGCGCGGCC ACGCTGGCCG CGCTGGACGG CCTGATGCTG GAGATCCTGT TCGATGCGCT GCTCTTCTTC GTTCCGCTGC TGGTGGCCAT CTGGTGGCTG TCGAAGCTGA TCGCACGCCC GCTGCGGCAG TTGGCCATCA CCGCCCGGCA CTGGGAGTTC TCCACCGCCC AGGAACAGAT CCGCCGGGTG CACTCCTGGT ACTTCGAGGC CGAACAGCTC AAGCTCGCCA TGCTGGGCGG CCTGGCGCTG CTGCACGGCA AGCTCGGCCG GCTCAACCAG GAAAACATCA CCGCCCCCTT GACCGGGCTG GTCAACCGGC GCGGCCAGCA GTTCGCCCTG GAGCGTTGGC AGGAGCAGCA GCAGCCGTTC GCCGTGATCG TCCTGGACAT CGACCATTTC AAGCAGGTCA ACGATAACCA TGGCCACGAC GTGGGCGACC AGGTGCTGCA GCACGTGAGC CATCTGATGG ACAGCGTCTC GCGCAGCAGC GACCTGGTCT GCCGGAGCGG CGGCGAGGAG TTCGTCCTGC TGCTGCCGGA AACCGGCCTG GAAGCGGCCA CGCAGGTCGC CGAACGGCTG CGCGGCCTGA TCAGCCACAC ACAGACGCCC ACCGGCTCCT TCGTCACCAT CTCCACCGGC GTCGCCCACT GGCCGGGTAG CGCCAGTTCG GTGCCGGCGG TGCTCAAGCT GGCCGACGAA GCGCTGTACC GGGCCAAGCG GAACGGCCGC AACCGAGTCG TCGTGGCCGG ACAGCGGGAA ATCGGCAGCG AGGATGCGCC GCTGGGCTGA
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Protein sequence | MYRLDLRRLI LLLTIAATLL TLLNSFHASY RTLHRQLIAQ TLEANRAYAA KLAHSTDNFL KAAQQQLAYS AALLPELFDR PERLDAEVTR LKGQTGTFNG VFIVRTDGRV LATAPNSLGL VGGVLKTREM LAALSARQPR ISAPYAGVRG YLLVFLSQPV FARDGRYLGY VGGAIHLGKH DGSLQALLGN HYYQDGSQLY VVDANRHLLH HQDPSRIGEV VTGNPAVEAV LRGEEGSRQL LDSQRTDMLA GYAPVASTGW GVVAQRPSAA TLAALDGLML EILFDALLFF VPLLVAIWWL SKLIARPLRQ LAITARHWEF STAQEQIRRV HSWYFEAEQL KLAMLGGLAL LHGKLGRLNQ ENITAPLTGL VNRRGQQFAL ERWQEQQQPF AVIVLDIDHF KQVNDNHGHD VGDQVLQHVS HLMDSVSRSS DLVCRSGGEE FVLLLPETGL EAATQVAERL RGLISHTQTP TGSFVTISTG VAHWPGSASS VPAVLKLADE ALYRAKRNGR NRVVVAGQRE IGSEDAPLG
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