Gene Avin_00160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_00160 
Symbolfmt 
ID7758984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp18811 
End bp19788 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content73% 
IMG OID643802943 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_002797259 
Protein GI226942186 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAAGCC TTTTCTTTCC TGAGCGAGAA ACCATGACCC AGCCCCTGCG CCTCGTCTTC 
GCCGGCACTC CCGAATTCGC CGCCGAGCAC CTCCAGGCCT TGCTGACCGC CGGCCAGCGG
CCCGTCGCCG TCTATACTCA GCCGGACCGT CCCGCCGGAC GCGGGCAGAA GCCGATGGCC
AGCCCGGTGA AACGGCTCGC CCTGCAGCAC GGCATTCCCG TCCTGCAACC GCCGACCCTG
CGCGACGCCG CCGCCCAGGC GGAGCTGGCG GCGCTCGAAC CCGACCTGCT GCTGGTGGTC
GCCTACGGGC TGATCCTGCC GCAGGCGGTG CTGGACATCC CGCGTCTCGG CTGCGTCAAC
AGCCATGCCT CGCTGCTGCC GCGCTGGCGC GGCGCGGCGC CGATCCAGCG GGCGATCGAG
GCCGGCGACG GTGAATCCGG GGTCACCGTG ATGCGCATGG AGGCCGGCCT GGACACCGGG
CCGATGCTAC TCAAGGTCGC CACGCCGATC CGCCCCGACG ACACCGGCGG CAGCCTGCAC
GATCGCCTGG CCGGGCTGGG CGCGCAGGCC CTGGTCGAGG CCATCGGCGC CCTGGCGGCC
GGCGGACTCG CCGGCGAGAC GCAGGACGAC GCCCTGGCCA CCTATGCGCA CAAGCTGAAC
AAGGACGAGG CGCGGCTCGA CTGGAGCCGC CCGGCGGACG AGCTGGAACG GCGGATCCGC
GCCTTCGATC CCTGGCCGGT CTGCCACAGC AGCCTGGACG GCGCGCCGCT GAAAGTGTTC
GCCGCGAGCG TGGAGCAGGG CGGGGGAGCG CCGGGAACCA TCCTCGCCGC CAGCCGCGAC
GGCCTGACCG TGGCCTGCGG CAGCGGCGCC CTGCGCCTGA CCCGCCTGCA ACTGCCGGGC
GGCAGGCCGC TGGCCTTCGC CGAGCTGTAC AACAGCCGCC GCGAGCAGTT CGCCGTCGGC
CAGGTGCTGG GCACATGA
 
Protein sequence
MASLFFPERE TMTQPLRLVF AGTPEFAAEH LQALLTAGQR PVAVYTQPDR PAGRGQKPMA 
SPVKRLALQH GIPVLQPPTL RDAAAQAELA ALEPDLLLVV AYGLILPQAV LDIPRLGCVN
SHASLLPRWR GAAPIQRAIE AGDGESGVTV MRMEAGLDTG PMLLKVATPI RPDDTGGSLH
DRLAGLGAQA LVEAIGALAA GGLAGETQDD ALATYAHKLN KDEARLDWSR PADELERRIR
AFDPWPVCHS SLDGAPLKVF AASVEQGGGA PGTILAASRD GLTVACGSGA LRLTRLQLPG
GRPLAFAELY NSRREQFAVG QVLGT