Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_a028 |
Symbol | |
ID | 7409804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012040 |
Strand | + |
Start bp | 30763 |
End bp | 35142 |
Gene Length | 4380 bp |
Protein Length | 1459 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 643718723 |
Product | putative adhesin/invasin |
Protein accession | YP_002576152 |
Protein GI | 222778515 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAACTA AAGAGGGTAA AATGAAATCA GTAATATATA AAAAATCTTT AAAAGCAAAA TATCCAAAAA AAAGAATATT AAGAAAAATC TTGTTGTCTT TTTTGTTAAG TTCATCTTTA ATAAATCAAA CACACTCAAG TGTTATTTTT GACAATGTAG ATAGTGAGAT TGAAATATTA AGTAAAAAAA TTATTTCATC AACCAATACT GATAATGAAA TTTTACCTTC AAGCGCCCAA AACACAAACA CTATTCAATC ACAAGAAACA CAAGTTAATG AAGCTAGTGA AATTATAAAA GAAGAAAAAG ATAGTAAAGA ACTTAGTGAG CAAGAAATCT ATGCTAAATA TGCAAAAATA AACAAAGAAA TCAGAAGTAT AGACAAAGAA TTAAGTAATA ATTCAAACAA TAATGAACTA ATTGCTAAAA AAGAACAACT AATTCAAGAA AAAAATAATC TTGATAATAA TTTAAAAGAA ATTAATAATG AAGAAGATAA TACAAATTTT CAAGAACAAA CTATAAGAAA AGCAAAAGTA AAAGCTCATC GCATAATCTC TAGAGAAAAA CCAAATGTAA AAAGCAAACA AGTAGAAATT TATAGAGAAA ATAGAATATT AGATATTGAA AATATTATAA CTAACGAAAC AGGCACTAAA TGGGCTAAAT TAGCAAATAA AGAAGAATAT ATTTCAGCTA AGTGGCTTGA GTTTGATGAT AAAGAAGTTA TCAAAGAACA CACTCATACT AATTTTAAAG ACAAAAAAAT TATCAAAAAA CCTTTTGAAA CTGTTTATCT TGAAAACCCT ACAAATGCAA ATTATTATAA TGAAAATTTA AAAACACAAA AAGCTTTAAA TGATAATAAA AAAGATAATA ATTTAAGCAA AGAAGATCAA GAATTTTCAA ATAAAGTAAT GAAAGTTATT CAAACAGCTG GTGCTATTTA TGATAGTGAA GATAGCAAAA GCAAAGAAGA AATTGTAAAA AATATGGCAA GTTCTTATTT AAATACAAGT GCAAATGAAC TAGCTAAAGA ATTTATTGAT TCATTAAATA CTTCTATTAA TACAGATTTT TCATTTAATT ACAACGAAAG AAGCGGTTTT AGTGGTAATG CTAAAGCACT TTTACCTATT GTAAGTGAAG ATAATCCAAA AATATCTTAT TTTTTACAAA GTGGTATAGG CGAATTTGCT AATGATAGAA CCATAGGACA CTTTGGTGGT GGTATAAGAT ATTATCCAAA CGCAACAGCT TTAAATAATT CAGGTAATAT TATGTTAGGA TTAAACTCAG TCTATGATCA TGATTTTAGC AGAGGGCATA AAAGAATGTC TTTGGGTGCT GAAGCTATGG TAGATACACT TGCATTTAAT GCAAATGTAT ATCAAAGATT AAGTAGCTGG ATAGATAGCT ATGATTTTGA TAAAGATTAT GTGCAAGAAC GCCCTGCAAA TGGCTGGGAC GCAAAAATAA AATATGCCTT TCCTTCTCTT ATTAATGTTT CATTTTTTGC AAAAATGGGA CAATGGTATG GCAATAAAGT AGGTATTTTT GGAGCAAATA GCGTTGATGA TTTAGAGAAA AATCCATTAA TATATGAAGG GGGAATTTCA TATTCTCCAT TCCCTGCACT AACTTTTACT TTAAGTCATA GCAGAAGTGC AGAGAGTTCT AAAAAGAATA CTTCAATTAA TGCAAACATT AATATACCAC TTGATGAAAA AGCTATGAAA TTAGCATTTG AGCCAAAACT AGCAGGAATT AGTAATACTA TTGAAGGCAC TAGAACTCAA TTTATTGATA GAGATTATTC TATGGTTCTT GAATATAGAG CAACTCCAAA TAAGTATCAT ATTTCTTATT GTGGGGATTT AGGTAATGAT AAACATTGTA TATTGCTAAA AAATGGCTTT GATGAAGTAG TAAAAAATAC TCCTATGAGA GTTACACCAA CTCATTCTTG TGTAGTATTT GAAAAAGGTT TTGATTATAT TACAGACAAT AGCGGAAAAG TTTATGTGCA AATTATTCGT TCTTGCACTC CAAAAACTGA TTTAAATGCA GTAGCTGGCG AAGCAAATGG TAAATTTCCT ATTTCAATTA TAAAACTTGA TTTTAAAATT AAAGCAGATC CTGAAAAAAT AGAAAGATTT GAAGAAAGTC TTATCACTTT AGCAGGTGGA AACTTAGCTA ATAATTTAAA AGTTGTTTGG AGATTAATAG GCAAAGGTGA ATTAATAAAA ACAAATACTT CAGATACAAC TGATAACAAT GGTGAAGCTA TTATCAAATA CAAAGCTGAT GATACTATGA AAGACAAAGA AGAAGTTAAA GTTATTGCTA GTGTTAATGG GGTTGAGTTT AAAGCACCTG TGCAAATTAT GGTATTTGGT AATAACGATA ATGATTTAAG CATTGATAAA GAAGTCATAG GAAATAAAGA AATAGCTATT GCTACTTATA AAAATTTACG CCCAAATAAA ACTAATGTAA AGTGGAGATT AGATGGCGAG GATAAAGCTT TATTCATCCT AGAAAATGAA AATAAAAGCT CTACTGCTAA AGAATTACAA CTTATTGCAG ATAATAAAGG CGAAAGCAAA GTTAAAATCA TAGGATTGGG AAATAATGGC AAGGTAAAAA TCTTTGCTAA AAATATTAAT GATGAATCAG TTAGCGAAAA AAACAAAGAA TTAGAGGTTA AAAATTATAA AGCTACTATG ATTTTACCAA CACATAAACA CCCAATTACA AATACTCCAT TTGAAAATGG AACAATTGAT TATGTGAGTG AGTTTGAAGT TAAACTTACA GGATTAATGC CAAATACTAA AGTAGAATGG ATAGCAAAAG ATACACAGAA TAATAAAACA TTAAGAATTA GCAATAACAA AGAAACTACT TCAAATGAAA AAGGCGAGAG TAAAGTAGTA TTTGAAGCAA TCAAAGATTA TAATGTTAAA AATTTAGAAA TTACAGCTAT TTATAATCAA AGTCTTGCAA ACAAAATTGA AGTTAAAGAT AATATCAAAC TTTATCAATA TTCTTTAGCA ATGAATAGTC AAAAAGATAA GCTTGACGCT TATGAAAATG GCTTAGCTAC AAAAAATTTA GTTTTAGATA AAACTGAAGT TAAAGTTACA GGTGGAAAGC CAAATGAAAA AGTAGAATGG GATTTAACTG GCGATGGCAC ATTAAGTAAT CAAGAATTAA GCTTTGATCA AAATGGAGAA GCTAAAGCTT TATTGACTTC AAAAACTCCA TTTAAAACTC CTATCAAAAT TGTTACTTCA GGTGTAGGAA AAAATTCAAA TAAAGTTATA ACATATGATC TAAGAACATT TACACCAGTA ATAACATATC CAGTATTTGA TTCTACTCTT TACGGCAAAC ACGAAAAAAC TATAGATTAT GATACAGATT ATTCTATTTT AGTAAAAGGA CTTTTACCTG ATAGCATAAT AGAACCTATT ACAAATGGAG TAATTAAACC AAAAAGCAAT AGTGTGCAAG TAAATAACAA AGGAGAAGCG ACAATTGCTT ATCACAAGAT AAGTGATTTT AATACTAAAA AAATAAAACC ACAATTTAAA TATATTAAAA GTGGAGATAC TAAAGAAACT TTTACTATGA ATGATATTAA TTTGTATCAA TACAAATTAA GCATTTCAAG TGATAAAACT GAACTTGTAG GCGATGAAAT ATTTAAAGTA ACAGTGAGAG GTGGAAAACC AAACGCAAGT GTAGAATGGA CTTTAACTGG AGATGGAAAA ATTACCTCAA AAGATAGTAA ATTTAATGCT AAAGGCGAGG CTTATTTAAA TGGTCAAGGA AAATCACCCT TTAATAACAG CATAAATGTG GAAGCTAAAG CTTTTAATCA AATATTAAAA GCTAGTGCTA AAATTAGTAT TTATGAATCT AGAGGAATAT TAGCTCATCC TACAGGAAAT AAAAATGGTG GAAATGGAAG AACTGCATTA TTAGGAAATG ATAATGGAGA AGATGGACAA GCTTTTGGTA ATTATACAAA CGGATACTCT ATTTTTACTT TAGTAGGACA TAATGGTAAT TTTGATTTGG GAATTTATGG ATATAAAAAT ATTGAAGATA TAAGAAATGC AAATATCAAA ATCACCTATA CTCCTGCATA TGGAGGAAAT AAACAATGGA ATTTAAATTA TTTTATTAGT TCAAAAATTT ATTATTTAGG AAATACATAT TTACCTTTTG ATATGAATCA TTATACTTAT TTATTATTCA GCAAGGAAGA AGCTTCTATT CCAACTAAAC AAAACAACGG AATTTATAAG TTTGAAGATT TAAATAATAA ATACATAAAG CCCACTTATT TGCACTTGAA ATTACCTTGA
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Protein sequence | MRTKEGKMKS VIYKKSLKAK YPKKRILRKI LLSFLLSSSL INQTHSSVIF DNVDSEIEIL SKKIISSTNT DNEILPSSAQ NTNTIQSQET QVNEASEIIK EEKDSKELSE QEIYAKYAKI NKEIRSIDKE LSNNSNNNEL IAKKEQLIQE KNNLDNNLKE INNEEDNTNF QEQTIRKAKV KAHRIISREK PNVKSKQVEI YRENRILDIE NIITNETGTK WAKLANKEEY ISAKWLEFDD KEVIKEHTHT NFKDKKIIKK PFETVYLENP TNANYYNENL KTQKALNDNK KDNNLSKEDQ EFSNKVMKVI QTAGAIYDSE DSKSKEEIVK NMASSYLNTS ANELAKEFID SLNTSINTDF SFNYNERSGF SGNAKALLPI VSEDNPKISY FLQSGIGEFA NDRTIGHFGG GIRYYPNATA LNNSGNIMLG LNSVYDHDFS RGHKRMSLGA EAMVDTLAFN ANVYQRLSSW IDSYDFDKDY VQERPANGWD AKIKYAFPSL INVSFFAKMG QWYGNKVGIF GANSVDDLEK NPLIYEGGIS YSPFPALTFT LSHSRSAESS KKNTSINANI NIPLDEKAMK LAFEPKLAGI SNTIEGTRTQ FIDRDYSMVL EYRATPNKYH ISYCGDLGND KHCILLKNGF DEVVKNTPMR VTPTHSCVVF EKGFDYITDN SGKVYVQIIR SCTPKTDLNA VAGEANGKFP ISIIKLDFKI KADPEKIERF EESLITLAGG NLANNLKVVW RLIGKGELIK TNTSDTTDNN GEAIIKYKAD DTMKDKEEVK VIASVNGVEF KAPVQIMVFG NNDNDLSIDK EVIGNKEIAI ATYKNLRPNK TNVKWRLDGE DKALFILENE NKSSTAKELQ LIADNKGESK VKIIGLGNNG KVKIFAKNIN DESVSEKNKE LEVKNYKATM ILPTHKHPIT NTPFENGTID YVSEFEVKLT GLMPNTKVEW IAKDTQNNKT LRISNNKETT SNEKGESKVV FEAIKDYNVK NLEITAIYNQ SLANKIEVKD NIKLYQYSLA MNSQKDKLDA YENGLATKNL VLDKTEVKVT GGKPNEKVEW DLTGDGTLSN QELSFDQNGE AKALLTSKTP FKTPIKIVTS GVGKNSNKVI TYDLRTFTPV ITYPVFDSTL YGKHEKTIDY DTDYSILVKG LLPDSIIEPI TNGVIKPKSN SVQVNNKGEA TIAYHKISDF NTKKIKPQFK YIKSGDTKET FTMNDINLYQ YKLSISSDKT ELVGDEIFKV TVRGGKPNAS VEWTLTGDGK ITSKDSKFNA KGEAYLNGQG KSPFNNSINV EAKAFNQILK ASAKISIYES RGILAHPTGN KNGGNGRTAL LGNDNGEDGQ AFGNYTNGYS IFTLVGHNGN FDLGIYGYKN IEDIRNANIK ITYTPAYGGN KQWNLNYFIS SKIYYLGNTY LPFDMNHYTY LLFSKEEASI PTKQNNGIYK FEDLNNKYIK PTYLHLKLP
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