| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_a018 |
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| Symbol | |
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| ID | 7409794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012040 |
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| Strand | + |
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| Start bp | 20896 |
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| End bp | 22071 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 643718713 |
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| Product | conjugal transfer protein TrbI/VirB10 |
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| Protein accession | YP_002576142 |
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| Protein GI | 222778505 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAATC AAGAAAAACA AGAATTAAAA GATATGGATT TACAAAGTGA GTTGCAAGCA
CAAAGCGTTA ATGTTAAAAA AATTCAAATC TATGTATTCT TTATTGCTTG TGTATTTATA
TTATTGATTT TTGCATATAT CTTTGCAAAA TCTTTTATTG GTAGTAGTGA TGATACTGCA
AATACACAAG CAAAAGAAGT TAATAAAGAC ATTGCTAGTA GTGTGAAATT AAAAGATTTT
ATTTTGCCTC AAAAAGAAGA ACCTGTTAAA GAAGAAACAA AGAGTTTTGA AGAAGTATTG
AAAGAAAGAG AACAGGAAAA ACCCGTTGAA GTAACTTCAA AAGAAAATCC TTTCGAGCTT
ATCTCAAAAC CTTTACAACC AAGAATAGTA AAAGGTGCAG GGTTAGTTGT GGTAAGTAGT
AGTAGTGATG GTGGGGCTTT TAATGCACAA GAAAACAATA CACAAGAAAG CTCAAATAAT
ATTTTTAATT CTAAACCTAT GCAAGGAGAC AATGCTTTAT TATCTAATGG ATCAAATGAT
TTTATCGGAG ATGTTTTTAC CCCAACTAGT GCTAGTGTTA GTCAGTTTGA TCCAAATTTA
TTATTATCCA AAGGAACTTA TATAGGTTGT TCTTTAAAAA CTCGTTTAGT TAGCACTATT
AAAGGGGGTA TTGCTTGTAT TGTTTCAAAT GATGTTTATT CTTCAAATGG CAATGTTCTT
TTAATTGAAA AAGGAAGCAC CATTACAGGA AGTTTTAGTT CAGGACAATT AAATGATGGT
ATGGATAGGC TTTTTGTTAT TTGGCAAGAA ATAAGAACGC CTAATAATAT TATTATACCA
GTTTATTCAG GTGCAACTGA TGAGCTTGGA GCAAGTGGAA TACAAGGATG GGTAGATCAT
CATTATATGA AACGCTTTGG TTCAGCTATT TTATTATCAA TAATTGATGA TTCTTTAAAT
ATTTTAGCTA ATCAAGTTAT TAATAAAAAA GAAAATAGCG TTGATTATAC GGAAAATTCA
AGAGAAACTT CTCGTGAAAT AGCTAATACT GCTTTAGAAA AAATGATTAA TATCCAACCA
ACTCTTTACA AAAATCACGG TGATTTAGTA GGTGTATATG TTAATAAAGA TATTGATTTT
TCTAAGGTTT ATCAATTAAA AAGAAAGGGC TTTTAA
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| Protein sequence | MSNQEKQELK DMDLQSELQA QSVNVKKIQI YVFFIACVFI LLIFAYIFAK SFIGSSDDTA
NTQAKEVNKD IASSVKLKDF ILPQKEEPVK EETKSFEEVL KEREQEKPVE VTSKENPFEL
ISKPLQPRIV KGAGLVVVSS SSDGGAFNAQ ENNTQESSNN IFNSKPMQGD NALLSNGSND
FIGDVFTPTS ASVSQFDPNL LLSKGTYIGC SLKTRLVSTI KGGIACIVSN DVYSSNGNVL
LIEKGSTITG SFSSGQLNDG MDRLFVIWQE IRTPNNIIIP VYSGATDELG ASGIQGWVDH
HYMKRFGSAI LLSIIDDSLN ILANQVINKK ENSVDYTENS RETSREIANT ALEKMINIQP
TLYKNHGDLV GVYVNKDIDF SKVYQLKRKG F
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