Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_a017 |
Symbol | |
ID | 7409793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012040 |
Strand | + |
Start bp | 19964 |
End bp | 20899 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 643718712 |
Product | conjugal transfer protein TraK/VirB9 |
Protein accession | YP_002576141 |
Protein GI | 222778504 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAAAA ATATTAGCCT AGCCCTTTCT TTTTCATTTT TGGCTTTACC TGTTTTTGCA TTAAATGAAC CGCAAAAATC AGAATACGAT CAACGCGTAG CACATGCTGA GTATAACTCT AAAGATGTTT TTAAAATGGT AGCTAGAAAT GGTTTTGTAA GTATGATTGA ATTTAGCGAT GAAGAAGTCA TTATAAATAC CGCTACAGGA TTTTCTGAAG GTTGGGATTT AATAGAGAAA AAAAATCTTT TATTTATTAA ACCAAAAGCT TATAAAACTA GACTTTTTGT AGAAAATGAT CCTTATAATC AAGGTCAGCA AAAAGAGATG ATTGTTGATC CAAATCCAAA AGACTGGAAA ACAAATTTAA TTGTTACCAC TAATTTAAAA ACTTATATTT TTGATTTATT GCTAACTAAT GATAGCAAGC AAGCAACTTA TAAATTGTCT TTTAGCCACG CTGATAAAAT CTTAAAGCAA GAGAATAAAA TAAAAAAAGA GCTAGAAAAG AAAATTGTAA GAGAAGAGCT TGATAAAAAT ATAGTTCCTA GAAACTGGGA TTTTTTAATG AAAGCGAATA AAGGAAGTGA AGATATAGCA CCAAATTATG CTTATGATGA TGGTGTTTTT ACTTACTTAG GTTTTGATAA CACAAAAACA TTTCCGAGTG TGTTTTTATA TGAAAATGGC AAAGAAATGA TCTTAAATAC TCATATTAAA AAAGACGGAA AATATGATGT TTTAGTAGTT CAAAAAATTG CAAAACAAAT TCTATTAAGA AGTGGAGATA AGGTTGTTGG AATTTTTAAT AATGGCTATG GAAAAAATCC TTTAGATAAA ACTAGAGAAA CCTCTAATGA AAATATACAA AGAGTAATAA ACGATCCAAG TAAAACACTT TTACTAGAAC AATCTTTATT AGGAAATGAG CAATGA
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Protein sequence | MIKNISLALS FSFLALPVFA LNEPQKSEYD QRVAHAEYNS KDVFKMVARN GFVSMIEFSD EEVIINTATG FSEGWDLIEK KNLLFIKPKA YKTRLFVEND PYNQGQQKEM IVDPNPKDWK TNLIVTTNLK TYIFDLLLTN DSKQATYKLS FSHADKILKQ ENKIKKELEK KIVREELDKN IVPRNWDFLM KANKGSEDIA PNYAYDDGVF TYLGFDNTKT FPSVFLYENG KEMILNTHIK KDGKYDVLVV QKIAKQILLR SGDKVVGIFN NGYGKNPLDK TRETSNENIQ RVINDPSKTL LLEQSLLGNE Q
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