Gene Cla_a017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_a017 
Symbol 
ID7409793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012040 
Strand
Start bp19964 
End bp20899 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content28% 
IMG OID643718712 
Productconjugal transfer protein TraK/VirB9 
Protein accessionYP_002576141 
Protein GI222778504 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3504] Type IV secretory pathway, VirB9 components 
TIGRFAM ID[TIGR02781] P-type conjugative transfer protein VirB9 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAAA ATATTAGCCT AGCCCTTTCT TTTTCATTTT TGGCTTTACC TGTTTTTGCA 
TTAAATGAAC CGCAAAAATC AGAATACGAT CAACGCGTAG CACATGCTGA GTATAACTCT
AAAGATGTTT TTAAAATGGT AGCTAGAAAT GGTTTTGTAA GTATGATTGA ATTTAGCGAT
GAAGAAGTCA TTATAAATAC CGCTACAGGA TTTTCTGAAG GTTGGGATTT AATAGAGAAA
AAAAATCTTT TATTTATTAA ACCAAAAGCT TATAAAACTA GACTTTTTGT AGAAAATGAT
CCTTATAATC AAGGTCAGCA AAAAGAGATG ATTGTTGATC CAAATCCAAA AGACTGGAAA
ACAAATTTAA TTGTTACCAC TAATTTAAAA ACTTATATTT TTGATTTATT GCTAACTAAT
GATAGCAAGC AAGCAACTTA TAAATTGTCT TTTAGCCACG CTGATAAAAT CTTAAAGCAA
GAGAATAAAA TAAAAAAAGA GCTAGAAAAG AAAATTGTAA GAGAAGAGCT TGATAAAAAT
ATAGTTCCTA GAAACTGGGA TTTTTTAATG AAAGCGAATA AAGGAAGTGA AGATATAGCA
CCAAATTATG CTTATGATGA TGGTGTTTTT ACTTACTTAG GTTTTGATAA CACAAAAACA
TTTCCGAGTG TGTTTTTATA TGAAAATGGC AAAGAAATGA TCTTAAATAC TCATATTAAA
AAAGACGGAA AATATGATGT TTTAGTAGTT CAAAAAATTG CAAAACAAAT TCTATTAAGA
AGTGGAGATA AGGTTGTTGG AATTTTTAAT AATGGCTATG GAAAAAATCC TTTAGATAAA
ACTAGAGAAA CCTCTAATGA AAATATACAA AGAGTAATAA ACGATCCAAG TAAAACACTT
TTACTAGAAC AATCTTTATT AGGAAATGAG CAATGA
 
Protein sequence
MIKNISLALS FSFLALPVFA LNEPQKSEYD QRVAHAEYNS KDVFKMVARN GFVSMIEFSD 
EEVIINTATG FSEGWDLIEK KNLLFIKPKA YKTRLFVEND PYNQGQQKEM IVDPNPKDWK
TNLIVTTNLK TYIFDLLLTN DSKQATYKLS FSHADKILKQ ENKIKKELEK KIVREELDKN
IVPRNWDFLM KANKGSEDIA PNYAYDDGVF TYLGFDNTKT FPSVFLYENG KEMILNTHIK
KDGKYDVLVV QKIAKQILLR SGDKVVGIFN NGYGKNPLDK TRETSNENIQ RVINDPSKTL
LLEQSLLGNE Q