Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_a016 |
Symbol | |
ID | 7409792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012040 |
Strand | + |
Start bp | 19359 |
End bp | 19967 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 643718711 |
Product | conjugal transfer protein TraJ/VirB8 |
Protein accession | YP_002576140 |
Protein GI | 222778503 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3736] Type IV secretory pathway, component VirB8 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTGAAA AATCAAATCA AAGAGCTTGG TTAGTTGCAT TTATAAGTAT GGCAATATCA ATTATTGCTG TAATTGCTGT AATTTTCTTA ACACCATTAA AAACTACCGA ACCTTATGTG ATTAGAGTAG ATAATACTAC TGGTATGGTG GATATTATTA CTAGCTTACA AGAAGAGCAA ATTAGTTCTA TTGAAGCTTT AGACAAATAC TTTATCTCTC AATATATAAA AGCTAGAGAA GGTTATTATT ATAAGTTTTT AAATCAAGAT TATGTTCTTA CTCAATTAAT GAGTGATGAA AATGTTGCAA ATGAGTATAG AGCTATCTAT GCTGGCGATA ATGCTTTAGA TCAAATTTAT AAAGATAATG TTGAAGTAAG AGTTAAGATT TTAAGTATTG TTCTTGGAAA TAGCAATGGA GTAAAAACCT CTACTATAAG AGCATTAATT ACTAAAAAAG ATTCTGTAAC AAAAAGCACA CAGCAATCAA CCAAAGTTAT AACTTTGGCG TATGATTTTT TACTAGCAAA AACAAGTGAA GAAAATAGAA TTTTAAACCC TCTTGGCTTT AAGGTTACTA ACTATAGAGT TGATGAGGAA ATAAGATGA
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Protein sequence | MIEKSNQRAW LVAFISMAIS IIAVIAVIFL TPLKTTEPYV IRVDNTTGMV DIITSLQEEQ ISSIEALDKY FISQYIKARE GYYYKFLNQD YVLTQLMSDE NVANEYRAIY AGDNALDQIY KDNVEVRVKI LSIVLGNSNG VKTSTIRALI TKKDSVTKST QQSTKVITLA YDFLLAKTSE ENRILNPLGF KVTNYRVDEE IR
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