Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_a003 |
Symbol | |
ID | 7409779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012040 |
Strand | - |
Start bp | 7383 |
End bp | 7985 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 643718698 |
Product | site-specific recombinase/resolvase |
Protein accession | YP_002576127 |
Protein GI | 222778490 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000421132 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAATAG CATATGTAAG AATTAGTACA GCAAAACAAG ACTCAGAAGT CCAAAAACTC CAAATATACG AATATTGTAT AAAAAACAAA ATTAATATTG ATGAAGTTAT GGAAGTTGAA ATGAGTTCAA GAAAAAGTTT AGAAAAAAGG CGTATGAATG AATTAAAAGA TAAACTCAAT GAAGGTGATT TATTAATTTG CACAGAACTT TCAAGATTAG GAAGAAGTAT GCTTGAAGTT ATTACATTAA TATTAGAACT TTCTGAAAAG GGTGTGCAAT TTGTTTTTTT ACGACAACCT GAATTAAGTT CATTTAACAA TCCTTCTCAA AAATTACTCC TTTCTTTCTA CGCTTATGTT TCAGAAACAG AGAGAGACTT TATCTCACAA AGAACAAAAG CAGGACTTGC TAATGCACGC AAAAATGGAA AAAATATAGG TCGTCCTACA AATAGTTTTA ATAGTATGTA TGATAAAGAT GAAGATCTAA TAAAAGAGCT TATATCTAAA AAAATAACCT TACGCAATAT TTGGAAATTT TTAGGCGAAA AAGGAACTTA CAATAACTTT CATTATTTTT GCAAAAGAAG AAAATTGACA TAA
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Protein sequence | MVIAYVRIST AKQDSEVQKL QIYEYCIKNK INIDEVMEVE MSSRKSLEKR RMNELKDKLN EGDLLICTEL SRLGRSMLEV ITLILELSEK GVQFVFLRQP ELSSFNNPSQ KLLLSFYAYV SETERDFISQ RTKAGLANAR KNGKNIGRPT NSFNSMYDKD EDLIKELISK KITLRNIWKF LGEKGTYNNF HYFCKRRKLT
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