Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_a001 |
Symbol | |
ID | 7409818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012040 |
Strand | + |
Start bp | 1 |
End bp | 1317 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 643718696 |
Product | nickase/relaxase |
Protein accession | YP_002576125 |
Protein GI | 222778488 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0555425 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAGAT TTAAAATTTT TGATGATGAG ATCATAGCAA AAAGAGTTTA TACTAAAATA GAAGTTGGAT CTAAATCTAC ATATAATTTT GTTAAAAAAA ATATATCAAA TAAAACAAAT AAAGTTTTTA GAAAAAACAC TGAAGTTGTT GTAAAAATTA CATCAGGTTC GAAAAATTTA CAAGCAGTTT GCAAACATTT AGATTATATT TCAAGAGAAG GAACAATAGA AGTAATTACA AGTGATTTTG ATATATTAGA AGGAAAAGAT GAGTTAAAAA TTTTAAAAAA AATTTATGAA AATGAAGGTG CACCCATTCC TAGATTTGGG CAAGAAAAAA AAGAAAAAAG ACATACTATT AATATGGTTT TTTCTATGCA AGATTATAAA AATGCACCTC CAGAAAAAAT GAAAAAAGCT GTTTTAATGA CATTAAAAAA AATGTATCCA GATAATTTTT TTGCAGTTGC TTTTCATGAT GATACTGATA ATCCACATTG TCATGTTTGT TTAAAAGTTG CAGATAAAAA TGGAAAAAGA ATTAATCCAA AAAAATCAGA TTTAATGAAT TTGAGATTAT CTTTTGCTAA AGCATTAAAC AATTTAGGTG TGGAAGCAAA AGCAACTATT CGTTCAAAAA ACAATGAAGT ATCCTATAAA CTTGAAAAAA ATAAAGAACA AACTAAAATG CATTATTATC AAGTTTTAGA TTATGGAAAA GCAAAATATA AATTTAGTCT TGATGAGAAT GCTAAAGATA GTTTTTATGT GAAATATAGA ACAAAAAAAG GTATAGCTGT AATATGGAGT AATGATCTTG AAAGAGTTAT TAAAGAAAAT AAAATTTTAA AAGGGGAATA TGCAAAGTTT AAAATTATAG GACAAGAAAC ATATCAAATT AAGAAAAAAA TTAAAGCAAA TGGAAAGACT TTTGAAGTAA CCAAAATGGC AAAAAAATCT GTTTGGGACG CTTCTGTTTT AGGTAGAGAA AAAGAGCTAA AATCATTGCA ATCAGATGAA AAAAATAAGC CAAAATATAC TATAAAGGAA AACAATGAGA GAGATTATAC AGAACAATAT AGACAGAGAA TCTTACAAGA GTCCAGTAAT AAATCAAACA TCCCAAGAGA ATCTGCCAAA GAAAGAGACT CTATGCGAAT ATTGTCCGAA CAGTCTGTGG TTCATGAGCG AAAAGGAACT CAAATGCCTA TGCACATCAA TGCACTCAAT CAGCTACAGC AAGGAAAGCG AGAACGAACC GATAGTAGCT TGCGATGGAC AAATTCTAGG AATAATGAGA TTGAAAGAGA TGGATAA
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Protein sequence | MSRFKIFDDE IIAKRVYTKI EVGSKSTYNF VKKNISNKTN KVFRKNTEVV VKITSGSKNL QAVCKHLDYI SREGTIEVIT SDFDILEGKD ELKILKKIYE NEGAPIPRFG QEKKEKRHTI NMVFSMQDYK NAPPEKMKKA VLMTLKKMYP DNFFAVAFHD DTDNPHCHVC LKVADKNGKR INPKKSDLMN LRLSFAKALN NLGVEAKATI RSKNNEVSYK LEKNKEQTKM HYYQVLDYGK AKYKFSLDEN AKDSFYVKYR TKKGIAVIWS NDLERVIKEN KILKGEYAKF KIIGQETYQI KKKIKANGKT FEVTKMAKKS VWDASVLGRE KELKSLQSDE KNKPKYTIKE NNERDYTEQY RQRILQESSN KSNIPRESAK ERDSMRILSE QSVVHERKGT QMPMHINALN QLQQGKRERT DSSLRWTNSR NNEIERDG
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