Gene Cla_1558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_1558 
SymbolcmeR 
ID7411304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand+ 
Start bp1509878 
End bp1510504 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content29% 
IMG OID643718679 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002576109 
Protein GI222824535 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAAA AACTTTCTTC GAAATCTCAA GCAAGACTTG AAAAAATCAA ACAAATTGCT 
GCGGAGTCGT TTTTAGAAAA CGGCTACGAA GCAACCAATC TCAAAGATAT TATCAAGCAA 
GCTGGTGGTT CATTTTCTTG CGTATACGAG CATTTTAAAA GCAAAGAAGG TTTATTTGAA 
GCGGTTTTGA ATGACTTTGC AGAAAATCAT TTTCTAGCTA TTTTAAATAA AAATATGCAA 
CTTTCACCCA ATGCGAATTT AGAAGAATTT CTACATCAGT TTGCTAAAGC TTATTTGGGG 
ATTTTCAATG ATGCTAAAAC CATAGCCATA GTAAGACTTT TATATTCTGA AATTTACAAT 
GAAAAATTTG ATTTTGGAAA ATGGTTTAAA GGGGGTAATA GAAAAGAGGT AGAATATGTA 
CTTCAAAAAA GATTTGAAGA AGAAAATAAT GAAAATTTAG CTAAAAATGC TGAATTTTTA 
AGCTATACAT TTTGTGCTAT GCTTAGGGGA ACCTTTTTTA TACAAAGTAC TTTTGAAAAC 
AAGGTTTTAA TGAGTAAAAA AGAGCAAGAA AATCATGCAA AAAAAGTTGT TAAGCTTTTT 
ACTCAAGGTG TTGTTAATTT TAATTAA
 
Protein sequence
MIKKLSSKSQ ARLEKIKQIA AESFLENGYE ATNLKDIIKQ AGGSFSCVYE HFKSKEGLFE 
AVLNDFAENH FLAILNKNMQ LSPNANLEEF LHQFAKAYLG IFNDAKTIAI VRLLYSEIYN 
EKFDFGKWFK GGNRKEVEYV LQKRFEEENN ENLAKNAEFL SYTFCAMLRG TFFIQSTFEN 
KVLMSKKEQE NHAKKVVKLF TQGVVNFN